(120 nodes) Zinc finger, RING/FYVE/PHD-type network (Daedalea quercina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165TKB0	Ubiquitin carboxyl-terminal hydrolase. (527 aa)
	A0A165KHL7	RING-type domain-containing protein. (338 aa)
	A0A165KXS4	RBR-type E3 ubiquitin transferase. (561 aa)
	A0A165L4G7	Uncharacterized protein. (854 aa)
	A0A165L777	RING/U-box. (102 aa)
	SLX1	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (602 aa)
	A0A165LDI8	RING-type domain-containing protein. (439 aa)
	A0A165LH43	RING-type domain-containing protein. (695 aa)
	A0A165LIZ7	Uncharacterized protein. (1175 aa)
	A0A165LMR7	PHD-type domain-containing protein. (520 aa)
	A0A165LNX3	RING-type domain-containing protein. (187 aa)
	A0A165LRI2	RING-type domain-containing protein. (318 aa)
	A0A165M3Y0	RING-type domain-containing protein. (429 aa)
	A0A165M490	RING/U-box. (114 aa)
	A0A165M4P0	Uncharacterized protein. (523 aa)
	A0A165M760	Uncharacterized protein. (539 aa)
	A0A165M7D6	Chromo domain-containing protein. (866 aa)
	A0A165MER4	WD40 repeat-like protein. (506 aa)
	A0A165MG30	Uncharacterized protein. (237 aa)
	A0A165MKE0	U-box domain-containing protein. (1099 aa)
	A0A165MKV7	RING-type domain-containing protein. (549 aa)
	A0A165MLG3	RING-type domain-containing protein. (797 aa)
	A0A165MM49	PHD domain-containing protein. (1083 aa)
	A0A165MNA1	RING-type domain-containing protein. (367 aa)
	A0A165MYJ7	RING-type domain-containing protein. (240 aa)
	A0A165ND35	Chromatin modification-related protein. (444 aa)
	A0A165NE00	Clavaminate synthase-like protein. (709 aa)
	A0A165NFM1	Uncharacterized protein. (517 aa)
	A0A165NL38	RING-type domain-containing protein. (843 aa)
	A0A165NNN2	RING-type domain-containing protein. (283 aa)
	A0A165NNQ2	Uncharacterized protein. (1247 aa)
	A0A165NST8	Uncharacterized protein. (938 aa)
	A0A165NYK7	JmjC-domain-containing protein. (1165 aa)
	A0A165P0M3	RING-type domain-containing protein. (317 aa)
	A0A165P3D3	RING-type domain-containing protein. (338 aa)
	A0A165P5T1	SAP domain-containing protein. (340 aa)
	A0A165P5W0	RING-type domain-containing protein. (781 aa)
	A0A165P811	Uncharacterized protein. (961 aa)
	A0A165P8F9	Uncharacterized protein. (880 aa)
	A0A165PDY8	RING-CH-type domain-containing protein. (527 aa)
	A0A165PFS0	FYVE-type domain-containing protein. (804 aa)
	A0A165PJT0	RING-type domain-containing protein. (711 aa)
	A0A165PMA1	RING-type domain-containing protein. (1778 aa)
	A0A165PMP9	RING-type domain-containing protein. (284 aa)
	A0A165PMU7	Uncharacterized protein. (635 aa)
	A0A165PMW7	Uncharacterized protein. (670 aa)
	A0A165PMY2	RING-type domain-containing protein. (172 aa)
	A0A165PMZ7	Uncharacterized protein. (526 aa)
	A0A165PN80	Uncharacterized protein. (608 aa)
	A0A165PNV3	Uncharacterized protein. (1255 aa)
	A0A165PP13	FYVE-type domain-containing protein. (366 aa)
	A0A165PP30	PHD-type domain-containing protein. (1439 aa)
	A0A165PQ65	Ubiquitin carboxyl-terminal hydrolase. (805 aa)
	A0A165PU64	Uncharacterized protein. (1458 aa)
	A0A165PWJ2	Uncharacterized protein. (1319 aa)
	A0A165PXZ9	RING-type domain-containing protein. (752 aa)
	A0A165PZM1	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (726 aa)
	A0A165Q1D4	Uncharacterized protein. (1233 aa)
	A0A165Q382	RING-type domain-containing protein. (579 aa)
	A0A165Q4Q1	Uncharacterized protein. (389 aa)
	A0A165Q5U5	CDK-activating kinase assembly factor. (370 aa)
	A0A165Q633	PHD-type domain-containing protein. (902 aa)
	A0A165Q788	HTH TFE/IIEalpha-type domain-containing protein. (494 aa)
	A0A165QBF2	RCC1/BLIP-II protein. (562 aa)
	A0A165QBL7	RING-type domain-containing protein. (443 aa)
	A0A165QDG1	RING-type domain-containing protein. (162 aa)
	A0A165QDG7	RING-type domain-containing protein. (298 aa)
	A0A165QDI2	RING-type domain-containing protein. (406 aa)
	A0A165QP62	RING-type domain-containing protein. (904 aa)
	A0A165QSR7	RING-type domain-containing protein. (653 aa)
	A0A165QSZ1	Uncharacterized protein. (368 aa)
	A0A165QUZ3	RING-type domain-containing protein. (592 aa)
	A0A165R2U0	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family. (1003 aa)
	A0A165R6B0	RING-type domain-containing protein. (412 aa)
	A0A165RD74	UBR-type domain-containing protein. (433 aa)
	A0A165RE47	RING-type domain-containing protein. (452 aa)
	A0A165REC2	RING-type domain-containing protein. (954 aa)
	A0A165RED6	RING-type domain-containing protein. (146 aa)
	A0A165RIU0	RING-type domain-containing protein. (396 aa)
	A0A165RIU8	RING-CH-type domain-containing protein. (1530 aa)
	A0A165RLG6	Uncharacterized protein. (537 aa)
	A0A165RMX0	RING-type domain-containing protein. (620 aa)
	A0A165RXA4	HORMA-domain-containing protein. (897 aa)
	A0A165S1Q7	RING-type domain-containing protein. (119 aa)
	A0A165S1R8	RING-type domain-containing protein. (284 aa)
	A0A165S1S9	RING-type domain-containing protein. (131 aa)
	A0A165S394	RING-type domain-containing protein. (413 aa)
	A0A165S4F6	Uncharacterized protein. (1903 aa)
	A0A165S5I9	Chromatin modification-related protein. (292 aa)
	A0A165S6J6	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (381 aa)
	A0A165SA49	Uncharacterized protein. (247 aa)
	A0A165SCU2	PHD domain-containing protein. (631 aa)
	A0A165SGK6	Zf-UBP-domain-containing protein. (644 aa)
	A0A165SGQ0	PHD domain-containing protein. (128 aa)
	A0A165SH01	DWNN-domain-containing protein. (600 aa)
	A0A165SKE6	E3 ubiquitin protein ligase. (809 aa)
	A0A165SKH9	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (451 aa)
	A0A165SMM7	Uncharacterized protein. (259 aa)
	A0A165SN25	RING-type domain-containing protein. (388 aa)
	A0A165SUW1	RING-type domain-containing protein. (314 aa)
	A0A165T1Q6	RING-CH-type domain-containing protein. (264 aa)
	A0A165T2D9	Uncharacterized protein. (645 aa)
	A0A165T397	RING-type domain-containing protein. (419 aa)
	A0A165T4N6	Uncharacterized protein. (2290 aa)
	A0A165T4X5	Ubiquitin C-terminal hydrolase Ubp10. (534 aa)
	A0A165T9A0	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1234 aa)
	A0A165TCD9	Uncharacterized protein. (1138 aa)
	A0A165TEF5	Chromatin modification-related protein. (695 aa)
	A0A165TPV3	SP-RING-type domain-containing protein. (339 aa)
	A0A165TQ51	RING-type domain-containing protein. (528 aa)
	A0A165TQC7	RING-type domain-containing protein. (224 aa)
	A0A165TVR4	RBR-type E3 ubiquitin transferase. (503 aa)
	A0A165U5K2	Uncharacterized protein. (737 aa)
	A0A165U6M1	Uncharacterized protein. (781 aa)
	A0A165U8F7	RING-type domain-containing protein. (217 aa)
	A0A165UBA2	PHD-type domain-containing protein. (1014 aa)
	A0A165UFF4	RBR-type E3 ubiquitin transferase. (478 aa)
	A0A165UII6	RING-type domain-containing protein. (655 aa)
	A0A165UMH8	Cyclophilin-like protein. (528 aa)
	A0A165UMS4	Uncharacterized protein. (1077 aa)

Your Current Organism:

Daedalea quercina

NCBI taxonomy Id: 1314783
Other names: D. quercina L-15889, Daedalea quercina L-15889

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A165KXS4	A0A165LH43	A0A165KXS4	A0A165LH43	RBR-type E3 ubiquitin transferase.	RING-type domain-containing protein.	0.590
A0A165KXS4	A0A165M490	A0A165KXS4	A0A165M490	RBR-type E3 ubiquitin transferase.	RING/U-box.	0.961
A0A165KXS4	A0A165MG30	A0A165KXS4	A0A165MG30	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.558
A0A165KXS4	A0A165PMA1	A0A165KXS4	A0A165PMA1	RBR-type E3 ubiquitin transferase.	RING-type domain-containing protein.	0.611
A0A165KXS4	A0A165Q1D4	A0A165KXS4	A0A165Q1D4	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.821
A0A165KXS4	A0A165QBF2	A0A165KXS4	A0A165QBF2	RBR-type E3 ubiquitin transferase.	RCC1/BLIP-II protein.	0.518
A0A165KXS4	A0A165QBL7	A0A165KXS4	A0A165QBL7	RBR-type E3 ubiquitin transferase.	RING-type domain-containing protein.	0.590
A0A165KXS4	A0A165RIU0	A0A165KXS4	A0A165RIU0	RBR-type E3 ubiquitin transferase.	RING-type domain-containing protein.	0.590
A0A165KXS4	A0A165SH01	A0A165KXS4	A0A165SH01	RBR-type E3 ubiquitin transferase.	DWNN-domain-containing protein.	0.598
A0A165KXS4	A0A165UFF4	A0A165KXS4	A0A165UFF4	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.717
A0A165L4G7	A0A165LIZ7	A0A165L4G7	A0A165LIZ7	Uncharacterized protein.	Uncharacterized protein.	0.562
A0A165L777	A0A165M490	A0A165L777	A0A165M490	RING/U-box.	RING/U-box.	0.560
A0A165LH43	A0A165KXS4	A0A165LH43	A0A165KXS4	RING-type domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.590
A0A165LIZ7	A0A165L4G7	A0A165LIZ7	A0A165L4G7	Uncharacterized protein.	Uncharacterized protein.	0.562
A0A165LIZ7	A0A165M490	A0A165LIZ7	A0A165M490	Uncharacterized protein.	RING/U-box.	0.536
A0A165LIZ7	A0A165MG30	A0A165LIZ7	A0A165MG30	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A165LIZ7	A0A165PNV3	A0A165LIZ7	A0A165PNV3	Uncharacterized protein.	Uncharacterized protein.	0.454
A0A165LIZ7	A0A165PP13	A0A165LIZ7	A0A165PP13	Uncharacterized protein.	FYVE-type domain-containing protein.	0.562
A0A165LIZ7	A0A165PZM1	A0A165LIZ7	A0A165PZM1	Uncharacterized protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.565
A0A165LIZ7	A0A165Q1D4	A0A165LIZ7	A0A165Q1D4	Uncharacterized protein.	Uncharacterized protein.	0.649