(5 nodes) Protein folding in endoplasmic reticulum, and Protein refolding network (Rhizopogon vinicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B7ME44	HSP70-domain-containing protein. (331 aa)
	A0A1B7N0F2	TPR-like protein. (566 aa)
	A0A1B7N647	TPR-like protein. (569 aa)
	A0A1B7NE54	DnaJ-domain-containing protein. (372 aa)
	A0A1B7NI76	DnaJ-domain-containing protein. (319 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B7ME44	A0A1B7N0F2	HSP70-domain-containing protein.	TPR-like protein.	0.702
A0A1B7ME44	A0A1B7N647	HSP70-domain-containing protein.	TPR-like protein.	0.739
A0A1B7ME44	A0A1B7NE54	HSP70-domain-containing protein.	DnaJ-domain-containing protein.	0.728
A0A1B7ME44	A0A1B7NI76	HSP70-domain-containing protein.	DnaJ-domain-containing protein.	0.740
A0A1B7N0F2	A0A1B7ME44	TPR-like protein.	HSP70-domain-containing protein.	0.702
A0A1B7N0F2	A0A1B7N647	TPR-like protein.	TPR-like protein.	0.836
A0A1B7N0F2	A0A1B7NE54	TPR-like protein.	DnaJ-domain-containing protein.	0.923
A0A1B7N0F2	A0A1B7NI76	TPR-like protein.	DnaJ-domain-containing protein.	0.939
A0A1B7N647	A0A1B7ME44	TPR-like protein.	HSP70-domain-containing protein.	0.739
A0A1B7N647	A0A1B7N0F2	TPR-like protein.	TPR-like protein.	0.836
A0A1B7N647	A0A1B7NE54	TPR-like protein.	DnaJ-domain-containing protein.	0.822
A0A1B7NE54	A0A1B7ME44	DnaJ-domain-containing protein.	HSP70-domain-containing protein.	0.728
A0A1B7NE54	A0A1B7N0F2	DnaJ-domain-containing protein.	TPR-like protein.	0.923
A0A1B7NE54	A0A1B7N647	DnaJ-domain-containing protein.	TPR-like protein.	0.822
A0A1B7NE54	A0A1B7NI76	DnaJ-domain-containing protein.	DnaJ-domain-containing protein.	0.954
A0A1B7NI76	A0A1B7ME44	DnaJ-domain-containing protein.	HSP70-domain-containing protein.	0.740
A0A1B7NI76	A0A1B7N0F2	DnaJ-domain-containing protein.	TPR-like protein.	0.939
A0A1B7NI76	A0A1B7NE54	DnaJ-domain-containing protein.	DnaJ-domain-containing protein.	0.954