(5 nodes) Maintenance of DNA methylation network (Rhizopogon vinicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B7MRH1	YDG domain-containing protein. (207 aa)
	A0A1B7MRM4	YDG domain-containing protein. (287 aa)
	A0A1B7N3V4	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1218 aa)
	A0A1B7NBU8	YDG domain-containing protein. (302 aa)
	A0A1B7NIN9	Cytosine-specific methyltransferase. (1256 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B7MRH1	A0A1B7N3V4	YDG domain-containing protein.	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.922
A0A1B7MRH1	A0A1B7NIN9	YDG domain-containing protein.	Cytosine-specific methyltransferase.	0.925
A0A1B7MRM4	A0A1B7N3V4	YDG domain-containing protein.	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.922
A0A1B7MRM4	A0A1B7NIN9	YDG domain-containing protein.	Cytosine-specific methyltransferase.	0.926
A0A1B7N3V4	A0A1B7MRH1	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	YDG domain-containing protein.	0.922
A0A1B7N3V4	A0A1B7MRM4	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	YDG domain-containing protein.	0.922
A0A1B7N3V4	A0A1B7NBU8	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	YDG domain-containing protein.	0.921
A0A1B7NBU8	A0A1B7N3V4	YDG domain-containing protein.	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.921
A0A1B7NBU8	A0A1B7NIN9	YDG domain-containing protein.	Cytosine-specific methyltransferase.	0.929
A0A1B7NIN9	A0A1B7MRH1	Cytosine-specific methyltransferase.	YDG domain-containing protein.	0.925
A0A1B7NIN9	A0A1B7MRM4	Cytosine-specific methyltransferase.	YDG domain-containing protein.	0.926
A0A1B7NIN9	A0A1B7NBU8	Cytosine-specific methyltransferase.	YDG domain-containing protein.	0.929