(5 nodes) Response to ionizing radiation network (Rhizopogon vinicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B7NEQ4	Uncharacterized protein. (511 aa)
	A0A1B7NEG6	zf-4CXXC_R1 domain-containing protein. (835 aa)
	A0A1B7NAL0	Ku DNA-binding complex, Ku70 subunit. (666 aa)
	A0A1B7NGP5	Uncharacterized protein. (580 aa)
	A0A1B7NIM0	Rad51 domain-containing protein. (347 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B7NAL0	A0A1B7NEG6	Ku DNA-binding complex, Ku70 subunit.	zf-4CXXC_R1 domain-containing protein.	0.431
A0A1B7NAL0	A0A1B7NEQ4	Ku DNA-binding complex, Ku70 subunit.	Uncharacterized protein.	0.431
A0A1B7NAL0	A0A1B7NIM0	Ku DNA-binding complex, Ku70 subunit.	Rad51 domain-containing protein.	0.430
A0A1B7NEG6	A0A1B7NAL0	zf-4CXXC_R1 domain-containing protein.	Ku DNA-binding complex, Ku70 subunit.	0.431
A0A1B7NEG6	A0A1B7NEQ4	zf-4CXXC_R1 domain-containing protein.	Uncharacterized protein.	0.418
A0A1B7NEQ4	A0A1B7NAL0	Uncharacterized protein.	Ku DNA-binding complex, Ku70 subunit.	0.431
A0A1B7NEQ4	A0A1B7NEG6	Uncharacterized protein.	zf-4CXXC_R1 domain-containing protein.	0.418
A0A1B7NIM0	A0A1B7NAL0	Rad51 domain-containing protein.	Ku DNA-binding complex, Ku70 subunit.	0.430