(46 nodes) Intracellular protein transmembrane transport network (Rhizopogon vinicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B7N432	WD40 repeat-like protein. (349 aa)
	A0A1B7MI63	Uncharacterized protein. (227 aa)
	A0A1B7ML03	TPR-like protein. (637 aa)
	A0A1B7MLV6	AAA-domain-containing protein. (1083 aa)
	A0A1B7MLY8	J domain-containing protein. (655 aa)
	A0A1B7MPV3	SecY protein. (477 aa)
	A0A1B7MTF5	Translocation protein. (225 aa)
	A0A1B7MU68	DnaJ-domain-containing protein. (481 aa)
	A0A1B7MWT1	Uncharacterized protein. (254 aa)
	A0A1B7MYF7	ADP/ATP carrier receptor. (594 aa)
	A0A1B7MZN4	AAA-domain-containing protein. (1015 aa)
	A0A1B7N0X9	CHY-type domain-containing protein. (145 aa)
	A0A1B7N205	Zf-DNL-domain-containing protein. (110 aa)
	A0A1B7N392	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
	A0A1B7NGL7	Pex14_N domain-containing protein. (420 aa)
	A0A1B7NGM3	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (458 aa)
	A0A1B7NGQ5	Uncharacterized protein. (170 aa)
	A0A1B7NGR4	Tom7-domain-containing protein. (51 aa)
	A0A1B7NH80	Uncharacterized protein. (158 aa)
	A0A1B7NHC7	Mitochondrial import translocase, subunit Tom22. (155 aa)
	A0A1B7NHH3	Uncharacterized protein. (359 aa)
	A0A1B7NHZ6	RING-type domain-containing protein. (444 aa)
	A0A1B7NID3	Uncharacterized protein. (295 aa)
	A0A1B7NIP4	GrpE nucleotide exchange factor. (215 aa)
	A0A1B7NIS7	Uncharacterized protein. (352 aa)
	A0A1B7NIZ8	Uncharacterized protein. (269 aa)
	A0A1B7N448	CHCH domain-containing protein. (210 aa)
	A0A1B7N4H9	ClpX, ATPase regulatory subunit. (492 aa)
	A0A1B7N4M3	Tim17-domain-containing protein. (214 aa)
	A0A1B7N5G1	TPR-like protein. (691 aa)
	A0A1B7N614	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (445 aa)
	A0A1B7N6H7	SH3 domain-containing protein. (329 aa)
	A0A1B7N6M7	Mitochondrial import inner membrane translocase subunit Tim17/22. (159 aa)
	A0A1B7N7P5	Sulfhydryl oxidase. (199 aa)
	A0A1B7N9N8	Mitochondrial import protein Pam17. (192 aa)
	A0A1B7NA97	Chaperonin GroL; Belongs to the chaperonin (HSP60) family. (589 aa)
	A0A1B7NAR4	Chaperonin Cpn10; Belongs to the GroES chaperonin family. (107 aa)
	A0A1B7NAV0	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (571 aa)
	MED5	Mediator of RNA polymerase II transcription subunit 5; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (949 aa)
	A0A1B7NC76	GRIP domain-containing protein. (1116 aa)
	A0A1B7NDT8	SecE/sec61-gamma protein. (70 aa)
	A0A1B7NDW2	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (368 aa)
	A0A1B7NEB6	MAS20-domain-containing protein. (590 aa)
	A0A1B7NFC0	Uncharacterized protein. (123 aa)
	A0A1B7NFF6	RING-type domain-containing protein. (353 aa)
	A0A1B7NGD2	DnaJ-domain-containing protein. (459 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B7MI63	A0A1B7ML03	A0A1B7MI63	A0A1B7ML03	Uncharacterized protein.	TPR-like protein.	0.881
A0A1B7MI63	A0A1B7MLV6	A0A1B7MI63	A0A1B7MLV6	Uncharacterized protein.	AAA-domain-containing protein.	0.989
A0A1B7MI63	A0A1B7N432	A0A1B7MI63	A0A1B7N432	Uncharacterized protein.	WD40 repeat-like protein.	0.740
A0A1B7MI63	A0A1B7N5G1	A0A1B7MI63	A0A1B7N5G1	Uncharacterized protein.	TPR-like protein.	0.879
A0A1B7MI63	A0A1B7N6H7	A0A1B7MI63	A0A1B7N6H7	Uncharacterized protein.	SH3 domain-containing protein.	0.938
A0A1B7MI63	A0A1B7NC76	A0A1B7MI63	A0A1B7NC76	Uncharacterized protein.	GRIP domain-containing protein.	0.869
A0A1B7MI63	A0A1B7NDW2	A0A1B7MI63	A0A1B7NDW2	Uncharacterized protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.926
A0A1B7MI63	A0A1B7NFF6	A0A1B7MI63	A0A1B7NFF6	Uncharacterized protein.	RING-type domain-containing protein.	0.892
A0A1B7MI63	A0A1B7NGL7	A0A1B7MI63	A0A1B7NGL7	Uncharacterized protein.	Pex14_N domain-containing protein.	0.836
A0A1B7MI63	MED5	A0A1B7MI63	A0A1B7NC13	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 5; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.869
A0A1B7ML03	A0A1B7MI63	A0A1B7ML03	A0A1B7MI63	TPR-like protein.	Uncharacterized protein.	0.881
A0A1B7ML03	A0A1B7MLV6	A0A1B7ML03	A0A1B7MLV6	TPR-like protein.	AAA-domain-containing protein.	0.950
A0A1B7ML03	A0A1B7MZN4	A0A1B7ML03	A0A1B7MZN4	TPR-like protein.	AAA-domain-containing protein.	0.881
A0A1B7ML03	A0A1B7N432	A0A1B7ML03	A0A1B7N432	TPR-like protein.	WD40 repeat-like protein.	0.994
A0A1B7ML03	A0A1B7N5G1	A0A1B7ML03	A0A1B7N5G1	TPR-like protein.	TPR-like protein.	0.920
A0A1B7ML03	A0A1B7N6H7	A0A1B7ML03	A0A1B7N6H7	TPR-like protein.	SH3 domain-containing protein.	0.983
A0A1B7ML03	A0A1B7NC76	A0A1B7ML03	A0A1B7NC76	TPR-like protein.	GRIP domain-containing protein.	0.968
A0A1B7ML03	A0A1B7NDW2	A0A1B7ML03	A0A1B7NDW2	TPR-like protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.982
A0A1B7ML03	A0A1B7NFF6	A0A1B7ML03	A0A1B7NFF6	TPR-like protein.	RING-type domain-containing protein.	0.950
A0A1B7ML03	A0A1B7NGL7	A0A1B7ML03	A0A1B7NGL7	TPR-like protein.	Pex14_N domain-containing protein.	0.945