(10 nodes) Phosphorylation of RNA polymerase II C-terminal domain network (Rhizopogon vinicolor)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	A0A1B7NIR9	Cyclin-like protein; Belongs to the cyclin family. (362 aa)
	A0A1B7NIA3	DNA repair helicase. (795 aa)
	A0A1B7NEY2	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (372 aa)
	A0A1B7N064	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (483 aa)
	A0A1B7N4A1	Pkinase-domain-containing protein. (463 aa)
	A0A1B7N687	Uncharacterized protein. (590 aa)
	A0A1B7NES5	Nucleotide excision repair TFIIH subunit. (66 aa)
	A0A1B7MUZ8	Transcription factor Tfb4. (334 aa)
	A0A1B7MR20	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (370 aa)
	A0A1B7MKI5	Uncharacterized protein. (382 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B7MKI5	A0A1B7MR20	Uncharacterized protein.	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	0.865
A0A1B7MKI5	A0A1B7MUZ8	Uncharacterized protein.	Transcription factor Tfb4.	0.661
A0A1B7MKI5	A0A1B7NIR9	Uncharacterized protein.	Cyclin-like protein; Belongs to the cyclin family.	0.770
A0A1B7MR20	A0A1B7MKI5	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.865
A0A1B7MR20	A0A1B7MUZ8	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Transcription factor Tfb4.	0.997
A0A1B7MR20	A0A1B7N064	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.986
A0A1B7MR20	A0A1B7N4A1	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Pkinase-domain-containing protein.	0.886
A0A1B7MR20	A0A1B7N687	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.986
A0A1B7MR20	A0A1B7NES5	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Nucleotide excision repair TFIIH subunit.	0.847
A0A1B7MR20	A0A1B7NEY2	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.888
A0A1B7MR20	A0A1B7NIA3	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	DNA repair helicase.	0.990
A0A1B7MR20	A0A1B7NIR9	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Cyclin-like protein; Belongs to the cyclin family.	0.998
A0A1B7MUZ8	A0A1B7MKI5	Transcription factor Tfb4.	Uncharacterized protein.	0.661
A0A1B7MUZ8	A0A1B7MR20	Transcription factor Tfb4.	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	0.997
A0A1B7MUZ8	A0A1B7N064	Transcription factor Tfb4.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.998
A0A1B7MUZ8	A0A1B7N4A1	Transcription factor Tfb4.	Pkinase-domain-containing protein.	0.678
A0A1B7MUZ8	A0A1B7N687	Transcription factor Tfb4.	Uncharacterized protein.	0.998
A0A1B7MUZ8	A0A1B7NES5	Transcription factor Tfb4.	Nucleotide excision repair TFIIH subunit.	0.994
A0A1B7MUZ8	A0A1B7NEY2	Transcription factor Tfb4.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.678
A0A1B7MUZ8	A0A1B7NIA3	Transcription factor Tfb4.	DNA repair helicase.	0.998