(21 nodes) SCF ubiquitin ligase complex network (Rhizopogon vinicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B7NI06	RNI-like protein. (914 aa)
	A0A1B7NIM7	RNI-like protein. (486 aa)
	A0A1B7MVP6	DUF1769-domain-containing protein. (354 aa)
	A0A1B7MZN6	WD40 repeat-like protein. (1019 aa)
	A0A1B7N8I5	Uncharacterized protein. (731 aa)
	A0A1B7NA29	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (113 aa)
	A0A1B7NB40	RNI-like protein. (968 aa)
	A0A1B7NBK1	Uncharacterized protein. (463 aa)
	A0A1B7ND31	Ubiquitin. (77 aa)
	A0A1B7MFB4	Cullin-domain-containing protein; Belongs to the cullin family. (967 aa)
	A0A1B7MII0	Cullin-domain-containing protein; Belongs to the cullin family. (609 aa)
	A0A1B7MII7	Cullin-1. (104 aa)
	A0A1B7MJ35	WD40 repeat-like protein. (275 aa)
	A0A1B7MM29	WD40 repeat-like protein. (660 aa)
	A0A1B7MQX6	RNI-like protein. (640 aa)
	A0A1B7MU48	Uncharacterized protein. (470 aa)
	A0A1B7MVN1	Cullin-domain-containing protein; Belongs to the cullin family. (654 aa)
	A0A1B7NF15	Ubiquitin. (77 aa)
	A0A1B7NH77	Uncharacterized protein. (91 aa)
	A0A1B7NHC0	Cullin-domain-containing protein; Belongs to the cullin family. (517 aa)
	A0A1B7NHQ6	Cullin repeat-containing protein; Belongs to the cullin family. (479 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B7MFB4	A0A1B7MII7	Cullin-domain-containing protein; Belongs to the cullin family.	Cullin-1.	0.731
A0A1B7MFB4	A0A1B7MJ35	Cullin-domain-containing protein; Belongs to the cullin family.	WD40 repeat-like protein.	0.831
A0A1B7MFB4	A0A1B7MM29	Cullin-domain-containing protein; Belongs to the cullin family.	WD40 repeat-like protein.	0.897
A0A1B7MFB4	A0A1B7MQX6	Cullin-domain-containing protein; Belongs to the cullin family.	RNI-like protein.	0.789
A0A1B7MFB4	A0A1B7MU48	Cullin-domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.875
A0A1B7MFB4	A0A1B7MZN6	Cullin-domain-containing protein; Belongs to the cullin family.	WD40 repeat-like protein.	0.880
A0A1B7MFB4	A0A1B7N8I5	Cullin-domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.455
A0A1B7MFB4	A0A1B7NA29	Cullin-domain-containing protein; Belongs to the cullin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.815
A0A1B7MFB4	A0A1B7NB40	Cullin-domain-containing protein; Belongs to the cullin family.	RNI-like protein.	0.785
A0A1B7MFB4	A0A1B7NBK1	Cullin-domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.780
A0A1B7MFB4	A0A1B7ND31	Cullin-domain-containing protein; Belongs to the cullin family.	Ubiquitin.	0.880
A0A1B7MFB4	A0A1B7NF15	Cullin-domain-containing protein; Belongs to the cullin family.	Ubiquitin.	0.880
A0A1B7MFB4	A0A1B7NI06	Cullin-domain-containing protein; Belongs to the cullin family.	RNI-like protein.	0.884
A0A1B7MFB4	A0A1B7NIM7	Cullin-domain-containing protein; Belongs to the cullin family.	RNI-like protein.	0.780
A0A1B7MII0	A0A1B7MJ35	Cullin-domain-containing protein; Belongs to the cullin family.	WD40 repeat-like protein.	0.831
A0A1B7MII0	A0A1B7MM29	Cullin-domain-containing protein; Belongs to the cullin family.	WD40 repeat-like protein.	0.897
A0A1B7MII0	A0A1B7MQX6	Cullin-domain-containing protein; Belongs to the cullin family.	RNI-like protein.	0.789
A0A1B7MII0	A0A1B7MU48	Cullin-domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.875
A0A1B7MII0	A0A1B7MZN6	Cullin-domain-containing protein; Belongs to the cullin family.	WD40 repeat-like protein.	0.880
A0A1B7MII0	A0A1B7N8I5	Cullin-domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.455