(24 nodes) SNF2, N-terminal network (Rhizopogon vinicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B7N9T9	Uncharacterized protein. (1200 aa)
	A0A1B7MQM1	Uncharacterized protein. (1742 aa)
	A0A1B7MQ85	Uncharacterized protein. (799 aa)
	A0A1B7MND1	Uncharacterized protein. (995 aa)
	A0A1B7MMD8	Uncharacterized protein. (729 aa)
	A0A1B7MLF5	Uncharacterized protein. (1465 aa)
	A0A1B7MLC5	SNF2_N domain-containing protein. (612 aa)
	A0A1B7NIW5	Uncharacterized protein. (1610 aa)
	A0A1B7NI26	Uncharacterized protein. (1820 aa)
	A0A1B7NHM7	Uncharacterized protein. (1321 aa)
	A0A1B7NEN9	Uncharacterized protein. (800 aa)
	A0A1B7ND78	Uncharacterized protein. (1606 aa)
	A0A1B7NCL1	Uncharacterized protein. (1151 aa)
	A0A1B7NB87	Uncharacterized protein. (1165 aa)
	A0A1B7MSK6	Helicase ATP-binding domain-containing protein. (478 aa)
	A0A1B7N6X9	Uncharacterized protein. (682 aa)
	A0A1B7N6B0	Uncharacterized protein. (1932 aa)
	A0A1B7N5A8	Uncharacterized protein. (885 aa)
	A0A1B7N501	Uncharacterized protein. (1202 aa)
	A0A1B7N253	Uncharacterized protein. (819 aa)
	A0A1B7MZ32	Uncharacterized protein. (1095 aa)
	A0A1B7MUZ3	Transcription regulator. (1443 aa)
	A0A1B7MU33	Helicase ATP-binding domain-containing protein. (2185 aa)
	A0A1B7MTZ4	Uncharacterized protein. (1083 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B7MLC5	A0A1B7N6B0	SNF2_N domain-containing protein.	Uncharacterized protein.	0.439
A0A1B7MLC5	A0A1B7NEN9	SNF2_N domain-containing protein.	Uncharacterized protein.	0.420
A0A1B7MLF5	A0A1B7MMD8	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A1B7MLF5	A0A1B7MND1	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A1B7MLF5	A0A1B7MQ85	Uncharacterized protein.	Uncharacterized protein.	0.490
A0A1B7MLF5	A0A1B7MSK6	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.695
A0A1B7MLF5	A0A1B7MTZ4	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A1B7MLF5	A0A1B7MUZ3	Uncharacterized protein.	Transcription regulator.	0.731
A0A1B7MLF5	A0A1B7MZ32	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A1B7MLF5	A0A1B7N253	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A1B7MLF5	A0A1B7N501	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A1B7MLF5	A0A1B7N6B0	Uncharacterized protein.	Uncharacterized protein.	0.650
A0A1B7MLF5	A0A1B7N9T9	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A1B7MLF5	A0A1B7NB87	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A1B7MLF5	A0A1B7NCL1	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A1B7MLF5	A0A1B7ND78	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A1B7MLF5	A0A1B7NEN9	Uncharacterized protein.	Uncharacterized protein.	0.584
A0A1B7MLF5	A0A1B7NHM7	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A1B7MLF5	A0A1B7NI26	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A1B7MLF5	A0A1B7NIW5	Uncharacterized protein.	Uncharacterized protein.	0.482