(8 nodes) Ubiquitin domain network (Rhizopogon vinicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B7MZA6	Ubiquitin-domain-containing protein. (159 aa)
	A0A1B7N273	Ubiquitin. (80 aa)
	A0A1B7ND31	Ubiquitin. (77 aa)
	A0A1B7NF15	Ubiquitin. (77 aa)
	K503DRAFT_4710	Ubiquitin-domain-containing protein. (454 aa)
	A0A1B7MZ45	Uncharacterized protein. (389 aa)
	A0A1B7MNN8	Polyubiquitin. (305 aa)
	A0A1B7MMU5	Ubiquitin-like protein. (296 aa)

Your Current Organism:

Rhizopogon vinicolor

NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B7MMU5	A0A1B7MZ45	A0A1B7MMU5	A0A1B7MZ45	Ubiquitin-like protein.	Uncharacterized protein.	0.883
A0A1B7MMU5	A0A1B7MZA6	A0A1B7MMU5	A0A1B7MZA6	Ubiquitin-like protein.	Ubiquitin-domain-containing protein.	0.913
A0A1B7MMU5	A0A1B7N273	A0A1B7MMU5	A0A1B7N273	Ubiquitin-like protein.	Ubiquitin.	0.911
A0A1B7MMU5	A0A1B7ND31	A0A1B7MMU5	A0A1B7ND31	Ubiquitin-like protein.	Ubiquitin.	0.809
A0A1B7MMU5	A0A1B7NF15	A0A1B7MMU5	A0A1B7NF15	Ubiquitin-like protein.	Ubiquitin.	0.809
A0A1B7MNN8	A0A1B7MZ45	A0A1B7MNN8	A0A1B7MZ45	Polyubiquitin.	Uncharacterized protein.	0.963
A0A1B7MNN8	A0A1B7MZA6	A0A1B7MNN8	A0A1B7MZA6	Polyubiquitin.	Ubiquitin-domain-containing protein.	0.980
A0A1B7MNN8	A0A1B7N273	A0A1B7MNN8	A0A1B7N273	Polyubiquitin.	Ubiquitin.	0.975
A0A1B7MNN8	A0A1B7ND31	A0A1B7MNN8	A0A1B7ND31	Polyubiquitin.	Ubiquitin.	0.890
A0A1B7MNN8	A0A1B7NF15	A0A1B7MNN8	A0A1B7NF15	Polyubiquitin.	Ubiquitin.	0.890
A0A1B7MZ45	A0A1B7MMU5	A0A1B7MZ45	A0A1B7MMU5	Uncharacterized protein.	Ubiquitin-like protein.	0.883
A0A1B7MZ45	A0A1B7MNN8	A0A1B7MZ45	A0A1B7MNN8	Uncharacterized protein.	Polyubiquitin.	0.963
A0A1B7MZ45	A0A1B7MZA6	A0A1B7MZ45	A0A1B7MZA6	Uncharacterized protein.	Ubiquitin-domain-containing protein.	0.968
A0A1B7MZ45	A0A1B7N273	A0A1B7MZ45	A0A1B7N273	Uncharacterized protein.	Ubiquitin.	0.951
A0A1B7MZ45	A0A1B7ND31	A0A1B7MZ45	A0A1B7ND31	Uncharacterized protein.	Ubiquitin.	0.404
A0A1B7MZ45	A0A1B7NF15	A0A1B7MZ45	A0A1B7NF15	Uncharacterized protein.	Ubiquitin.	0.404
A0A1B7MZ45	K503DRAFT_4710	A0A1B7MZ45	A0A1B7NJ66	Uncharacterized protein.	Ubiquitin-domain-containing protein.	0.963
A0A1B7MZA6	A0A1B7MMU5	A0A1B7MZA6	A0A1B7MMU5	Ubiquitin-domain-containing protein.	Ubiquitin-like protein.	0.913
A0A1B7MZA6	A0A1B7MNN8	A0A1B7MZA6	A0A1B7MNN8	Ubiquitin-domain-containing protein.	Polyubiquitin.	0.980
A0A1B7MZA6	A0A1B7MZ45	A0A1B7MZA6	A0A1B7MZ45	Ubiquitin-domain-containing protein.	Uncharacterized protein.	0.968