STRINGSTRING
AMK21106.1 AMK21106.1 AMK21383.1 AMK21383.1 AMK21389.1 AMK21389.1 AMK21394.1 AMK21394.1 AMK22253.1 AMK22253.1 AMK22254.1 AMK22254.1 sdhA sdhA sucC sucC AMK22511.1 AMK22511.1 AMK22512.1 AMK22512.1 AMK22513.1 AMK22513.1 AMK22573.1 AMK22573.1 AMK22742.1 AMK22742.1 pdhA pdhA AMK23329.1 AMK23329.1 AMK23748.1 AMK23748.1 AMK23750.1 AMK23750.1 AMK23841.1 AMK23841.1 AMK23894.1 AMK23894.1 AMK23904.1 AMK23904.1 AMK23905.1 AMK23905.1 sucA sucA sucD sucD sdhB sdhB AMK24105.1 AMK24105.1 AMK25302.1 AMK25302.1 AMK25974.1 AMK25974.1 AMK25975.1 AMK25975.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMK21106.1COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits. (1155 aa)
AMK21383.1COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. (51 aa)
AMK21389.1COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. (73 aa)
AMK21394.1COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. (145 aa)
AMK22253.1COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit. (110 aa)
AMK22254.1COG2142 Succinate dehydrogenase, hydrophobic anchor subunit. (129 aa)
sdhACOG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (600 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (399 aa)
AMK22511.1COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit. (435 aa)
AMK22512.1COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit. (354 aa)
AMK22513.1Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes. (423 aa)
AMK22573.1COG0372 Citrate synthase; Belongs to the citrate synthase family. (428 aa)
AMK22742.1COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (506 aa)
pdhAPyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (355 aa)
AMK23329.1Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (451 aa)
AMK23748.1COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. (464 aa)
AMK23750.1Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (428 aa)
AMK23841.1Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (889 aa)
AMK23894.1COG0538 Isocitrate dehydrogenases; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (406 aa)
AMK23904.1COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. (466 aa)
AMK23905.12-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (415 aa)
sucACOG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes. (931 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
sdhBCOG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (262 aa)
AMK24105.1COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (483 aa)
AMK25302.1FAD binding domain-containing protein 15; COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (556 aa)
AMK25974.1Dihydrolipoyllysine-residue acetyltransferase; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes. (431 aa)
AMK25975.1COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component. (780 aa)
Your Current Organism:
Sphingobium sp. TKS
NCBI taxonomy Id: 1315974
Other names: S. sp. TKS
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