STRINGSTRING
AMK21177.1 AMK21177.1 AMK21499.1 AMK21499.1 AMK21753.1 AMK21753.1 AMK21820.1 AMK21820.1 AMK21853.1 AMK21853.1 AMK21857.1 AMK21857.1 AMK22126.1 AMK22126.1 AMK22264.1 AMK22264.1 AMK22511.1 AMK22511.1 AMK22593.1 AMK22593.1 AMK22598.1 AMK22598.1 AMK22639.1 AMK22639.1 AMK22675.1 AMK22675.1 AMK22681.1 AMK22681.1 AMK22691.1 AMK22691.1 AMK22706.1 AMK22706.1 AMK22869.1 AMK22869.1 AMK22872.1 AMK22872.1 AMK22936.1 AMK22936.1 AMK22961.1 AMK22961.1 AMK22965.1 AMK22965.1 AMK23105.1 AMK23105.1 AMK23133.1 AMK23133.1 AMK23188.1 AMK23188.1 AMK23242.1 AMK23242.1 AMK23279.1 AMK23279.1 AMK23308.1 AMK23308.1 pdhA pdhA miaA miaA AMK23387.1 AMK23387.1 AMK23561.1 AMK23561.1 AMK23597.1 AMK23597.1 AMK23600.1 AMK23600.1 ispE ispE AMK23610.1 AMK23610.1 AMK23632.1 AMK23632.1 AMK23713.1 AMK23713.1 AMK23750.1 AMK23750.1 AMK23815.1 AMK23815.1 AMK24050.1 AMK24050.1 AMK24108.1 AMK24108.1 phhB phhB AMK24231.1 AMK24231.1 adk adk AMK24423.1 AMK24423.1 AMK24508.1 AMK24508.1 clpS clpS adk-2 adk-2 nadD nadD AMK25043.1 AMK25043.1 mtnD mtnD mtnC mtnC AMK25431.1 AMK25431.1 AMK25475.1 AMK25475.1 AMK25670.1 AMK25670.1 AMK25974.1 AMK25974.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMK21177.1COG1250 3-hydroxyacyl-CoA dehydrogenase. (292 aa)
AMK21499.1Carboxyvinyl-carboxyphosphonate phosphorylmutase; COG2513 PEP phosphonomutase and related enzymes. (297 aa)
AMK21753.1Beta-carotene hydroxylase. (169 aa)
AMK21820.1Hypothetical protein. (418 aa)
AMK21853.1Hypothetical protein. (246 aa)
AMK21857.1ADP-ribosylation/Crystallin J1; COG1397 ADP-ribosylglycohydrolase. (124 aa)
AMK22126.1LemA family protein. (200 aa)
AMK22264.1Hypothetical protein; COG3450 Predicted enzyme of the cupin superfamily. (241 aa)
AMK22511.1COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit. (435 aa)
AMK22593.1Hypothetical protein. (250 aa)
AMK22598.1Putative oxygenase. (234 aa)
AMK22639.1Transmembrane protein EpsH. (508 aa)
AMK22675.1Hypothetical protein. (464 aa)
AMK22681.1COG3823 Glutamine cyclotransferase. (248 aa)
AMK22691.1ATP12 ATPase; COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase. (231 aa)
AMK22706.1Hypothetical protein. (355 aa)
AMK22869.1Hypothetical protein. (135 aa)
AMK22872.1Hypothetical protein. (146 aa)
AMK22936.1Beta-lactamase-like protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing. (533 aa)
AMK22961.1Hypothetical protein. (211 aa)
AMK22965.1Hypothetical protein; COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis. (105 aa)
AMK23105.1Hypothetical protein. (123 aa)
AMK23133.1Glutathione-dependent formaldehyde-activating protein. (156 aa)
AMK23188.1COG3957 Phosphoketolase. (796 aa)
AMK23242.1Putative DNA methylase. (812 aa)
AMK23279.1Hypothetical protein. (99 aa)
AMK23308.1Glutathione-dependent formaldehyde-activating protein. (137 aa)
pdhAPyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (355 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (306 aa)
AMK23387.1NADPH-dependent F420 reductase; COG2085 Predicted dinucleotide-binding enzymes. (221 aa)
AMK23561.1Hypothetical protein. (131 aa)
AMK23597.1COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing. (330 aa)
AMK23600.1Hypothetical protein. (116 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (299 aa)
AMK23610.1Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (550 aa)
AMK23632.1COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (458 aa)
AMK23713.1Glutathione-dependent formaldehyde-activating protein. (139 aa)
AMK23750.1Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (428 aa)
AMK23815.1Riboflavin kinase; COG0196 FAD synthase; Belongs to the ribF family. (312 aa)
AMK24050.1COG2927 DNA polymerase III, chi subunit. (150 aa)
AMK24108.1Carboxyvinyl-carboxyphosphonate phosphorylmutase; COG2513 PEP phosphonomutase and related enzymes. (282 aa)
phhBCOG2154 Pterin-4a-carbinolamine dehydratase. (95 aa)
AMK24231.1ATP-dependent helicase HrpB; COG1643 HrpA-like helicases. (826 aa)
adkCOG0563 Adenylate kinase and related kinases. (101 aa)
AMK24423.1COG4240 Predicted kinase. (269 aa)
AMK24508.1COG3569 Topoisomerase IB. (335 aa)
clpSATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (135 aa)
adk-2Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (221 aa)
nadDNicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (209 aa)
AMK25043.1rpsU-divergently transcribed protein. (221 aa)
mtnDAcireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (183 aa)
mtnCEnolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family. (230 aa)
AMK25431.1COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing. (512 aa)
AMK25475.1Circadian clock protein KaiC; COG0467 RecA-superfamily ATPases implicated in signal transduction. (497 aa)
AMK25670.1NADPH-dependent F420 reductase; COG2085 Predicted dinucleotide-binding enzymes. (218 aa)
AMK25974.1Dihydrolipoyllysine-residue acetyltransferase; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes. (431 aa)
Your Current Organism:
Sphingobium sp. TKS
NCBI taxonomy Id: 1315974
Other names: S. sp. TKS
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