STRINGSTRING
AMK22129.1 AMK22129.1 gyrB gyrB AMK21247.1 AMK21247.1 AMK21276.1 AMK21276.1 AMK21587.1 AMK21587.1 AMK21884.1 AMK21884.1 AMK21996.1 AMK21996.1 AMK22098.1 AMK22098.1 AMK23432.1 AMK23432.1 AMK23530.1 AMK23530.1 AMK23532.1 AMK23532.1 mutL mutL AMK23709.1 AMK23709.1 AMK23789.1 AMK23789.1 AMK23791.1 AMK23791.1 AMK23835.1 AMK23835.1 AMK23939.1 AMK23939.1 AMK23953.1 AMK23953.1 AMK23959.1 AMK23959.1 AMK23975.1 AMK23975.1 AMK24068.1 AMK24068.1 AMK24236.1 AMK24236.1 AMK24306.1 AMK24306.1 AMK24540.1 AMK24540.1 AMK24639.1 AMK24639.1 AMK24716.1 AMK24716.1 AMK24759.1 AMK24759.1 AMK24830.1 AMK24830.1 AMK24919.1 AMK24919.1 AMK25190.1 AMK25190.1 AMK25355.1 AMK25355.1 AMK25413.1 AMK25413.1 AMK25446.1 AMK25446.1 AMK25476.1 AMK25476.1 AMK25479.1 AMK25479.1 AMK25783.1 AMK25783.1 AMK25938.1 AMK25938.1 AMK25956.1 AMK25956.1 AMK22160.1 AMK22160.1 AMK22358.1 AMK22358.1 AMK22423.1 AMK22423.1 AMK22561.1 AMK22561.1 AMK22572.1 AMK22572.1 htpG htpG AMK22776.1 AMK22776.1 AMK22805.1 AMK22805.1 AMK22824.1 AMK22824.1 parE parE AMK22906.1 AMK22906.1 AMK22990.1 AMK22990.1 AMK23013.1 AMK23013.1 AMK23182.1 AMK23182.1 AMK23266.1 AMK23266.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMK22129.1Two-component system sensor kinase CheA; COG0643 Chemotaxis protein histidine kinase and related kinases. (789 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (835 aa)
AMK21247.1Two-component system sensor histidine kinase; COG0642 Signal transduction histidine kinase. (338 aa)
AMK21276.1Hypothetical protein; COG0323 DNA mismatch repair enzyme (predicted ATPase). (264 aa)
AMK21587.1COG0642 Signal transduction histidine kinase. (446 aa)
AMK21884.1COG0642 Signal transduction histidine kinase. (440 aa)
AMK21996.1COG0642 Signal transduction histidine kinase. (450 aa)
AMK22098.1Putative signal transduction histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (368 aa)
AMK23432.1COG0642 Signal transduction histidine kinase. (781 aa)
AMK23530.1COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. (750 aa)
AMK23532.1Two-component system histidine kinase GlnL/NtrB; COG0642 Signal transduction histidine kinase. (365 aa)
mutLDNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (590 aa)
AMK23709.1Hypothetical protein; COG0642 Signal transduction histidine kinase. (222 aa)
AMK23789.1COG0642 Signal transduction histidine kinase. (441 aa)
AMK23791.1Two-component system sensor sporulation kinase C; COG2202 FOG: PAS/PAC domain. (653 aa)
AMK23835.1COG0642 Signal transduction histidine kinase. (434 aa)
AMK23939.1COG0642 Signal transduction histidine kinase. (439 aa)
AMK23953.1COG0642 Signal transduction histidine kinase. (448 aa)
AMK23959.1Multi-sensor hybrid histidine kinase; COG0591 Na+/proline symporter. (1109 aa)
AMK23975.1Histidine kinase; COG0642 Signal transduction histidine kinase. (422 aa)
AMK24068.1COG3920 Signal transduction histidine kinase. (188 aa)
AMK24236.1Integral membrane sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase. (663 aa)
AMK24306.1Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain. (690 aa)
AMK24540.1COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase). (856 aa)
AMK24639.1COG0642 Signal transduction histidine kinase. (470 aa)
AMK24716.1ATP-binding protein; COG0323 DNA mismatch repair enzyme (predicted ATPase). (566 aa)
AMK24759.1Multi-sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain. (607 aa)
AMK24830.1COG0642 Signal transduction histidine kinase. (815 aa)
AMK24919.1Signal transduction histidine kinase; COG2203 FOG: GAF domain. (507 aa)
AMK25190.1PAS/PAC sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain. (391 aa)
AMK25355.1COG2205 Osmosensitive K+ channel histidine kinase. (888 aa)
AMK25413.1COG0642 Signal transduction histidine kinase. (456 aa)
AMK25446.1COG0642 Signal transduction histidine kinase. (757 aa)
AMK25476.1Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain. (670 aa)
AMK25479.1Integral membrane sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase. (575 aa)
AMK25783.1Hypothetical protein; COG0323 DNA mismatch repair enzyme (predicted ATPase). (564 aa)
AMK25938.1COG0642 Signal transduction histidine kinase. (569 aa)
AMK25956.1COG0642 Signal transduction histidine kinase. (731 aa)
AMK22160.1COG0642 Signal transduction histidine kinase. (531 aa)
AMK22358.1Integral membrane sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase. (936 aa)
AMK22423.1Two-component system sensor histidine kinase YesM; COG3275 Putative regulator of cell autolysis. (370 aa)
AMK22561.1Multi-sensor signal transduction histidine kinase; COG2205 Osmosensitive K+ channel histidine kinase. (690 aa)
AMK22572.1COG0642 Signal transduction histidine kinase. (460 aa)
htpGHeat shock protein 90; Molecular chaperone. Has ATPase activity. (627 aa)
AMK22776.1COG0642 Signal transduction histidine kinase. (451 aa)
AMK22805.1COG4585 Signal transduction histidine kinase. (551 aa)
AMK22824.1COG4585 Signal transduction histidine kinase. (572 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (657 aa)
AMK22906.1Multi-sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain. (626 aa)
AMK22990.1COG0642 Signal transduction histidine kinase. (252 aa)
AMK23013.1PAS sensor protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (1559 aa)
AMK23182.1COG3920 Signal transduction histidine kinase. (346 aa)
AMK23266.1Hypothetical protein; COG0323 DNA mismatch repair enzyme (predicted ATPase). (555 aa)
Your Current Organism:
Sphingobium sp. TKS
NCBI taxonomy Id: 1315974
Other names: S. sp. TKS
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