(17 nodes) Mixed, incl. rRNA (uridine-N3-)-methyltransferase activity, and Response to host network (Penicillium subrubescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PENSUB_13391	Uncharacterized protein. (62 aa)
	PENSUB_12965	Uncharacterized protein. (306 aa)
	PENSUB_12626	Krueppel-like factor 3. (364 aa)
	PENSUB_9124	UPF0658 Golgi apparatus membrane protein C23H3.04. (343 aa)
	PENSUB_8588	Uncharacterized protein. (458 aa)
	PENSUB_7876	Uncharacterized protein. (211 aa)
	PENSUB_7578	BTB domain-containing protein. (79 aa)
	PENSUB_6436	25S rRNA (Uridine(2843)-N(3))-methyltransferase. (446 aa)
	PENSUB_4191	BTB domain-containing protein. (284 aa)
	PENSUB_2777	Zinc finger protein with KRAB and SCAN domains 3. (438 aa)
	PENSUB_2267	Uncharacterized protein. (217 aa)
	PENSUB_1754	Uncharacterized protein. (206 aa)
	PENSUB_1385	FAD-binding PCMH-type domain-containing protein. (367 aa)
	PENSUB_755	Uncharacterized protein. (110 aa)
	PENSUB_796	F-box domain-containing protein. (312 aa)
	PENSUB_754	C2H2-type domain-containing protein. (415 aa)
	PENSUB_429	Uncharacterized protein. (111 aa)

Your Current Organism:

Penicillium subrubescens

NCBI taxonomy Id: 1316194
Other names: CBS 132785, CBS H-21029, DTO 188-D6, IBT 31985, P. subrubescens

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PENSUB_12626	PENSUB_12965	A0A1Q5SX90	A0A1Q5SVB8	Krueppel-like factor 3.	Uncharacterized protein.	0.430
PENSUB_12626	PENSUB_1754	A0A1Q5SX90	A0A1Q5UJK9	Krueppel-like factor 3.	Uncharacterized protein.	0.430
PENSUB_12626	PENSUB_2267	A0A1Q5SX90	A0A1Q5UIB0	Krueppel-like factor 3.	Uncharacterized protein.	0.430
PENSUB_12626	PENSUB_4191	A0A1Q5SX90	A0A1Q5UD58	Krueppel-like factor 3.	BTB domain-containing protein.	0.430
PENSUB_12626	PENSUB_6436	A0A1Q5SX90	A0A1Q5U1U2	Krueppel-like factor 3.	25S rRNA (Uridine(2843)-N(3))-methyltransferase.	0.430
PENSUB_12626	PENSUB_7578	A0A1Q5SX90	A0A1Q5TLC2	Krueppel-like factor 3.	BTB domain-containing protein.	0.430
PENSUB_12626	PENSUB_8588	A0A1Q5SX90	A0A1Q5TG70	Krueppel-like factor 3.	Uncharacterized protein.	0.430
PENSUB_12965	PENSUB_12626	A0A1Q5SVB8	A0A1Q5SX90	Uncharacterized protein.	Krueppel-like factor 3.	0.430
PENSUB_12965	PENSUB_13391	A0A1Q5SVB8	A0A1Q5SRQ2	Uncharacterized protein.	Uncharacterized protein.	0.430
PENSUB_12965	PENSUB_1385	A0A1Q5SVB8	A0A1Q5UKE8	Uncharacterized protein.	FAD-binding PCMH-type domain-containing protein.	0.430
PENSUB_12965	PENSUB_2777	A0A1Q5SVB8	A0A1Q5UGU3	Uncharacterized protein.	Zinc finger protein with KRAB and SCAN domains 3.	0.430
PENSUB_12965	PENSUB_429	A0A1Q5SVB8	A0A1Q5UN29	Uncharacterized protein.	Uncharacterized protein.	0.430
PENSUB_12965	PENSUB_754	A0A1Q5SVB8	A0A1Q5UM86	Uncharacterized protein.	C2H2-type domain-containing protein.	0.430
PENSUB_12965	PENSUB_755	A0A1Q5SVB8	A0A1Q5UM79	Uncharacterized protein.	Uncharacterized protein.	0.430
PENSUB_12965	PENSUB_7876	A0A1Q5SVB8	A0A1Q5TJM1	Uncharacterized protein.	Uncharacterized protein.	0.430
PENSUB_12965	PENSUB_796	A0A1Q5SVB8	A0A1Q5UM85	Uncharacterized protein.	F-box domain-containing protein.	0.430
PENSUB_13391	PENSUB_12965	A0A1Q5SRQ2	A0A1Q5SVB8	Uncharacterized protein.	Uncharacterized protein.	0.430
PENSUB_13391	PENSUB_1754	A0A1Q5SRQ2	A0A1Q5UJK9	Uncharacterized protein.	Uncharacterized protein.	0.430
PENSUB_13391	PENSUB_2267	A0A1Q5SRQ2	A0A1Q5UIB0	Uncharacterized protein.	Uncharacterized protein.	0.430
PENSUB_13391	PENSUB_4191	A0A1Q5SRQ2	A0A1Q5UD58	Uncharacterized protein.	BTB domain-containing protein.	0.430