STRINGSTRING
PENSUB_1100 PENSUB_1100 PENSUB_8181 PENSUB_8181 PENSUB_11517 PENSUB_11517 PENSUB_10686 PENSUB_10686 PENSUB_11598 PENSUB_11598 PENSUB_8290 PENSUB_8290
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PENSUB_1100Capreomycidine synthase. (402 aa)
PENSUB_8181Capreomycidine synthase. (412 aa)
PENSUB_11517Beta_elim_lyase domain-containing protein. (259 aa)
PENSUB_10686Beta_elim_lyase domain-containing protein. (403 aa)
PENSUB_11598Low-specificity L-threonine aldolase. (371 aa)
PENSUB_8290Cysteine desulfurase, mitochondrial. (511 aa)
Your Current Organism:
Penicillium subrubescens
NCBI taxonomy Id: 1316194
Other names: CBS 132785, CBS H-21029, DTO 188-D6, IBT 31985, P. subrubescens
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