STRINGSTRING
GCA_001591385_01314 GCA_001591385_01314 GCA_001591385_01659 GCA_001591385_01659 GCA_001591385_02100 GCA_001591385_02100 GCA_001591385_02327 GCA_001591385_02327 GCA_001591385_04031 GCA_001591385_04031
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001591385_01314Unannotated protein. (221 aa)
GCA_001591385_01659Unannotated protein. (215 aa)
GCA_001591385_02100Unannotated protein. (256 aa)
GCA_001591385_02327Unannotated protein. (254 aa)
GCA_001591385_04031Unannotated protein. (237 aa)
Your Current Organism:
Variovorax soli
NCBI taxonomy Id: 1321611
Other names: V. soli NBRC 106424, Variovorax soli GH9-3, Variovorax soli NBRC 106424
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