Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BN4_11930 | BN4_20509 | BN4_11930 | BN4_20509 | Proline dehydrogenase. | Aldehyde Dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.943 |
| BN4_11930 | gabD | BN4_11930 | BN4_11327 | Proline dehydrogenase. | Putative succinate-semialdehyde dehydrogenase [NADP+]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.548 |
| BN4_11930 | gbsA | BN4_11930 | BN4_10270 | Proline dehydrogenase. | Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid. | 0.560 |
| BN4_12494 | BN4_20158 | BN4_12494 | BN4_20158 | Molybdopterin oxidoreductase Fe4S4 region; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Formate dehydrogenase, alpha subunit selenocysteine containing protein, fused to 20159; Function experimentally demonstrated in the studied genus; enzyme. | 0.916 |
| BN4_12494 | fdhA | BN4_12494 | BN4_11195 | Molybdopterin oxidoreductase Fe4S4 region; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Formate dehydrogenase subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.916 |
| BN4_12494 | fdhA-2 | BN4_12494 | BN4_12493 | Molybdopterin oxidoreductase Fe4S4 region; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Formate dehydrogenase, alpha subunit Selenocysteine containing protein, fused to 12494; Function experimentally demonstrated in the studied genus; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.999 |
| BN4_12494 | fdhA-3 | BN4_12494 | BN4_20159 | Molybdopterin oxidoreductase Fe4S4 region; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.997 |
| BN4_20158 | BN4_12494 | BN4_20158 | BN4_12494 | Formate dehydrogenase, alpha subunit selenocysteine containing protein, fused to 20159; Function experimentally demonstrated in the studied genus; enzyme. | Molybdopterin oxidoreductase Fe4S4 region; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.916 |
| BN4_20158 | fdhA | BN4_20158 | BN4_11195 | Formate dehydrogenase, alpha subunit selenocysteine containing protein, fused to 20159; Function experimentally demonstrated in the studied genus; enzyme. | Formate dehydrogenase subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.901 |
| BN4_20158 | fdhA-2 | BN4_20158 | BN4_12493 | Formate dehydrogenase, alpha subunit selenocysteine containing protein, fused to 20159; Function experimentally demonstrated in the studied genus; enzyme. | Formate dehydrogenase, alpha subunit Selenocysteine containing protein, fused to 12494; Function experimentally demonstrated in the studied genus; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.996 |
| BN4_20158 | fdhA-3 | BN4_20158 | BN4_20159 | Formate dehydrogenase, alpha subunit selenocysteine containing protein, fused to 20159; Function experimentally demonstrated in the studied genus; enzyme. | Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.998 |
| BN4_20509 | BN4_11930 | BN4_20509 | BN4_11930 | Aldehyde Dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Proline dehydrogenase. | 0.943 |
| BN4_20509 | betA | BN4_20509 | BN4_10271 | Aldehyde Dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.567 |
| BN4_20509 | gabD | BN4_20509 | BN4_11327 | Aldehyde Dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Putative succinate-semialdehyde dehydrogenase [NADP+]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.580 |
| BN4_20509 | gbsA | BN4_20509 | BN4_10270 | Aldehyde Dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid. | 0.568 |
| BN4_20509 | proA | BN4_20509 | BN4_10973 | Aldehyde Dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.941 |
| argC | asd | BN4_12762 | BN4_10122 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.669 |
| argC | proA | BN4_12762 | BN4_10973 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.407 |
| asd | argC | BN4_10122 | BN4_12762 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.669 |
| asd | gap | BN4_10122 | BN4_10486 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.463 |
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