STRINGSTRING
yiaY yiaY gabD gabD hisC hisC yiaY-3 yiaY-3 yiaY-4 yiaY-4 yiaY-5 yiaY-5 aatA aatA yhdR yhdR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yiaYFe-containing alcohol dehydrogenase; Function of strongly homologous gene; enzyme. (396 aa)
gabDPutative succinate-semialdehyde dehydrogenase [NADP+]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (464 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (366 aa)
yiaY-3Fe-containing alcohol dehydrogenase; Function of strongly homologous gene; enzyme. (380 aa)
yiaY-4Fe-containing alcohol dehydrogenase; Function of strongly homologous gene; enzyme. (393 aa)
yiaY-5Fe-containing alcohol dehydrogenase; Function of strongly homologous gene; enzyme. (389 aa)
aatAAspartate aminotransferase A. (390 aa)
yhdRPutative aspartate aminotransferase yhdR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (398 aa)
Your Current Organism:
Pseudodesulfovibrio piezophilus
NCBI taxonomy Id: 1322246
Other names: Desulfovibrio piezophilus C1TLV30, Desulfovibrio piezophilus DSM 21447, Desulfovibrio piezophilus JCM 15486, Desulfovibrio sp. C1TLV30, P. piezophilus C1TLV30, Pseudodesulfovibrio piezophilus C1TLV30, Pseudodesulfovibrio piezophilus DSM 21447, Pseudodesulfovibrio piezophilus JCM 15486
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