(17 nodes) CheY-like superfamily network (Acinetobacter equi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALH94847.1	Phosphate regulon transcriptional regulatory protein PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	ALH94229.1	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	ALH94566.1	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	sirA	Response regulator; In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	ALH94586.1	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
	ALH94869.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1153 aa)
	ALH94870.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	ALH94927.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	ALH94929.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1163 aa)
	ALH94968.1	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
	ALH95172.1	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (938 aa)
	ALH95226.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
	ALH95440.1	Pilus assembly protein PilG; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
	ALH95441.1	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
	ALH95722.1	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	ALH95851.1	Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	glnG	Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (491 aa)

Your Current Organism:

Acinetobacter equi

NCBI taxonomy Id: 1324350
Other names: A. equi, Acinetobacter equi Poppel et al. 2016, Acinetobacter sp. 114, CCUG 65204, DSM 27228, strain 114

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALH94229.1	ALH94869.1	AOY20_00990	AOY20_04590	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
ALH94229.1	ALH94929.1	AOY20_00990	AOY20_04915	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.844
ALH94229.1	ALH95172.1	AOY20_00990	AOY20_06275	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
ALH94229.1	ALH95722.1	AOY20_00990	AOY20_09375	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
ALH94229.1	sirA	AOY20_00990	AOY20_02990	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
ALH94566.1	ALH94586.1	AOY20_02885	AOY20_03000	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ALH94566.1	ALH94847.1	AOY20_02885	AOY20_04475	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate regulon transcriptional regulatory protein PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
ALH94566.1	ALH94869.1	AOY20_02885	AOY20_04590	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.484
ALH94566.1	ALH94929.1	AOY20_02885	AOY20_04915	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
ALH94566.1	ALH95172.1	AOY20_02885	AOY20_06275	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
ALH94566.1	ALH95226.1	AOY20_02885	AOY20_06560	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
ALH94566.1	ALH95440.1	AOY20_02885	AOY20_07770	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein PilG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ALH94586.1	ALH94566.1	AOY20_03000	AOY20_02885	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ALH94586.1	ALH94869.1	AOY20_03000	AOY20_04590	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.611
ALH94586.1	ALH94929.1	AOY20_03000	AOY20_04915	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
ALH94586.1	ALH95172.1	AOY20_03000	AOY20_06275	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
ALH94586.1	ALH95440.1	AOY20_03000	AOY20_07770	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein PilG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
ALH94586.1	sirA	AOY20_03000	AOY20_02990	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
ALH94847.1	ALH94566.1	AOY20_04475	AOY20_02885	Phosphate regulon transcriptional regulatory protein PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
ALH94847.1	ALH94869.1	AOY20_04475	AOY20_04590	Phosphate regulon transcriptional regulatory protein PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633