(20 nodes) Mixed, incl. tRNA-splicing ligase complex, and Cytoplasmic stress granule network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0H2UI69	No circadian temperature entrainment. (2084 aa)
	R4G4D2_RHOPR	Uncharacterized protein. (143 aa)
	R4G5D5_RHOPR	Putative carnitine deficiency associated protein. (245 aa)
	T1H9A2_RHOPR	Uncharacterized protein. (1015 aa)
	T1HA84_RHOPR	Ataxin. (944 aa)
	T1HC29_RHOPR	Uncharacterized protein. (1533 aa)
	T1HFA5_RHOPR	RRM domain-containing protein. (71 aa)
	T1HFF0_RHOPR	Uncharacterized protein. (369 aa)
	T1HHU8_RHOPR	Caprin-1_dimer domain-containing protein. (449 aa)
	T1HMR7_RHOPR	Uncharacterized protein. (462 aa)
	T1HNH5_RHOPR	Uncharacterized protein. (453 aa)
	T1HR09_RHOPR	Uncharacterized protein. (737 aa)
	T1HV50_RHOPR	Uncharacterized protein. (427 aa)
	T1I1P4_RHOPR	USP domain-containing protein; Belongs to the peptidase C19 family. (891 aa)
	T1I4W4_RHOPR	AD domain-containing protein. (192 aa)
	T1I6I8_RHOPR	Uncharacterized protein. (509 aa)
	T1I8Z0_RHOPR	Uncharacterized protein. (96 aa)
	T1IE08_RHOPR	G_PROTEIN_RECEP_F1_2 domain-containing protein. (315 aa)
	T1IFP1_RHOPR	Archease domain-containing protein. (155 aa)
	T1IGF7_RHOPR	Uncharacterized protein. (411 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0H2UI69	T1H9A2_RHOPR	A0A0H2UI69	T1H9A2	No circadian temperature entrainment.	Uncharacterized protein.	0.679
A0A0H2UI69	T1HV50_RHOPR	A0A0H2UI69	T1HV50	No circadian temperature entrainment.	Uncharacterized protein.	0.514
A0A0H2UI69	T1I8Z0_RHOPR	A0A0H2UI69	T1I8Z0	No circadian temperature entrainment.	Uncharacterized protein.	0.434
R4G4D2_RHOPR	T1I4W4_RHOPR	R4G4D2	T1I4W4	Uncharacterized protein.	AD domain-containing protein.	0.641
R4G5D5_RHOPR	T1HR09_RHOPR	R4G5D5	T1HR09	Putative carnitine deficiency associated protein.	Uncharacterized protein.	0.986
R4G5D5_RHOPR	T1I4W4_RHOPR	R4G5D5	T1I4W4	Putative carnitine deficiency associated protein.	AD domain-containing protein.	0.629
R4G5D5_RHOPR	T1I6I8_RHOPR	R4G5D5	T1I6I8	Putative carnitine deficiency associated protein.	Uncharacterized protein.	0.980
R4G5D5_RHOPR	T1IFP1_RHOPR	R4G5D5	T1IFP1	Putative carnitine deficiency associated protein.	Archease domain-containing protein.	0.640
R4G5D5_RHOPR	T1IGF7_RHOPR	R4G5D5	T1IGF7	Putative carnitine deficiency associated protein.	Uncharacterized protein.	0.939
T1H9A2_RHOPR	A0A0H2UI69	T1H9A2	A0A0H2UI69	Uncharacterized protein.	No circadian temperature entrainment.	0.679
T1H9A2_RHOPR	T1HHU8_RHOPR	T1H9A2	T1HHU8	Uncharacterized protein.	Caprin-1_dimer domain-containing protein.	0.639
T1H9A2_RHOPR	T1HNH5_RHOPR	T1H9A2	T1HNH5	Uncharacterized protein.	Uncharacterized protein.	0.872
T1H9A2_RHOPR	T1HV50_RHOPR	T1H9A2	T1HV50	Uncharacterized protein.	Uncharacterized protein.	0.929
T1H9A2_RHOPR	T1I8Z0_RHOPR	T1H9A2	T1I8Z0	Uncharacterized protein.	Uncharacterized protein.	0.433
T1HA84_RHOPR	T1HC29_RHOPR	T1HA84	T1HC29	Ataxin.	Uncharacterized protein.	0.450
T1HA84_RHOPR	T1HHU8_RHOPR	T1HA84	T1HHU8	Ataxin.	Caprin-1_dimer domain-containing protein.	0.459
T1HA84_RHOPR	T1HMR7_RHOPR	T1HA84	T1HMR7	Ataxin.	Uncharacterized protein.	0.524
T1HA84_RHOPR	T1HNH5_RHOPR	T1HA84	T1HNH5	Ataxin.	Uncharacterized protein.	0.504
T1HA84_RHOPR	T1HV50_RHOPR	T1HA84	T1HV50	Ataxin.	Uncharacterized protein.	0.789
T1HA84_RHOPR	T1I4W4_RHOPR	T1HA84	T1I4W4	Ataxin.	AD domain-containing protein.	0.999