(7 nodes) Regulator of chromosome condensation, RCC1 network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1H8Q5_RHOPR	Uncharacterized protein. (211 aa)
	T1HG56_RHOPR	Uncharacterized protein. (373 aa)
	T1HHW3_RHOPR	BTB domain-containing protein. (430 aa)
	T1HTA6_RHOPR	Uncharacterized protein. (364 aa)
	T1HWD3_RHOPR	Uncharacterized protein. (348 aa)
	T1I683_RHOPR	BTB domain-containing protein. (361 aa)
	T1I9S7_RHOPR	BTB domain-containing protein. (328 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1H8Q5_RHOPR	T1HG56_RHOPR	T1H8Q5	T1HG56	Uncharacterized protein.	Uncharacterized protein.	0.405
T1H8Q5_RHOPR	T1I683_RHOPR	T1H8Q5	T1I683	Uncharacterized protein.	BTB domain-containing protein.	0.630
T1H8Q5_RHOPR	T1I9S7_RHOPR	T1H8Q5	T1I9S7	Uncharacterized protein.	BTB domain-containing protein.	0.915
T1HG56_RHOPR	T1H8Q5_RHOPR	T1HG56	T1H8Q5	Uncharacterized protein.	Uncharacterized protein.	0.405
T1HG56_RHOPR	T1HHW3_RHOPR	T1HG56	T1HHW3	Uncharacterized protein.	BTB domain-containing protein.	0.420
T1HG56_RHOPR	T1HTA6_RHOPR	T1HG56	T1HTA6	Uncharacterized protein.	Uncharacterized protein.	0.409
T1HG56_RHOPR	T1HWD3_RHOPR	T1HG56	T1HWD3	Uncharacterized protein.	Uncharacterized protein.	0.643
T1HG56_RHOPR	T1I683_RHOPR	T1HG56	T1I683	Uncharacterized protein.	BTB domain-containing protein.	0.535
T1HG56_RHOPR	T1I9S7_RHOPR	T1HG56	T1I9S7	Uncharacterized protein.	BTB domain-containing protein.	0.548
T1HHW3_RHOPR	T1HG56_RHOPR	T1HHW3	T1HG56	BTB domain-containing protein.	Uncharacterized protein.	0.420
T1HHW3_RHOPR	T1HTA6_RHOPR	T1HHW3	T1HTA6	BTB domain-containing protein.	Uncharacterized protein.	0.510
T1HTA6_RHOPR	T1HG56_RHOPR	T1HTA6	T1HG56	Uncharacterized protein.	Uncharacterized protein.	0.409
T1HTA6_RHOPR	T1HHW3_RHOPR	T1HTA6	T1HHW3	Uncharacterized protein.	BTB domain-containing protein.	0.510
T1HTA6_RHOPR	T1I683_RHOPR	T1HTA6	T1I683	Uncharacterized protein.	BTB domain-containing protein.	0.615
T1HWD3_RHOPR	T1HG56_RHOPR	T1HWD3	T1HG56	Uncharacterized protein.	Uncharacterized protein.	0.643
T1HWD3_RHOPR	T1I9S7_RHOPR	T1HWD3	T1I9S7	Uncharacterized protein.	BTB domain-containing protein.	0.417
T1I683_RHOPR	T1H8Q5_RHOPR	T1I683	T1H8Q5	BTB domain-containing protein.	Uncharacterized protein.	0.630
T1I683_RHOPR	T1HG56_RHOPR	T1I683	T1HG56	BTB domain-containing protein.	Uncharacterized protein.	0.535
T1I683_RHOPR	T1HTA6_RHOPR	T1I683	T1HTA6	BTB domain-containing protein.	Uncharacterized protein.	0.615
T1I683_RHOPR	T1I9S7_RHOPR	T1I683	T1I9S7	BTB domain-containing protein.	BTB domain-containing protein.	0.506