(11 nodes) Mixed, incl. Protein kinase 5 complex, and CDK5 and ABL1 enzyme substrate 1/2 network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R4G456_RHOPR	Putative acidic fibroblast growth factor binding fibp. (355 aa)
	R4G5I6_RHOPR	Putative cyclin; Belongs to the cyclin family. (342 aa)
	T1HA31_RHOPR	Uncharacterized protein. (267 aa)
	T1HB14_RHOPR	Uncharacterized protein. (325 aa)
	T1HB15_RHOPR	Cyclin N-terminal domain-containing protein. (106 aa)
	T1HE37_RHOPR	Uncharacterized protein. (116 aa)
	T1HGD1_RHOPR	Cation_ATPase_C domain-containing protein. (1300 aa)
	T1HPR1_RHOPR	C2 domain-containing protein. (1265 aa)
	T1I7V9_RHOPR	Microtubule-associated protein. (144 aa)
	T1I987_RHOPR	PITH domain-containing protein. (206 aa)
	T1IBI5_RHOPR	Protein kinase domain-containing protein. (298 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4G456_RHOPR	T1HB14_RHOPR	R4G456	T1HB14	Putative acidic fibroblast growth factor binding fibp.	Uncharacterized protein.	0.453
R4G456_RHOPR	T1HB15_RHOPR	R4G456	T1HB15	Putative acidic fibroblast growth factor binding fibp.	Cyclin N-terminal domain-containing protein.	0.453
R4G456_RHOPR	T1HGD1_RHOPR	R4G456	T1HGD1	Putative acidic fibroblast growth factor binding fibp.	Cation_ATPase_C domain-containing protein.	0.779
R4G456_RHOPR	T1HPR1_RHOPR	R4G456	T1HPR1	Putative acidic fibroblast growth factor binding fibp.	C2 domain-containing protein.	0.893
R4G456_RHOPR	T1IBI5_RHOPR	R4G456	T1IBI5	Putative acidic fibroblast growth factor binding fibp.	Protein kinase domain-containing protein.	0.849
R4G5I6_RHOPR	T1I987_RHOPR	R4G5I6	T1I987	Putative cyclin; Belongs to the cyclin family.	PITH domain-containing protein.	0.876
R4G5I6_RHOPR	T1IBI5_RHOPR	R4G5I6	T1IBI5	Putative cyclin; Belongs to the cyclin family.	Protein kinase domain-containing protein.	0.530
T1HA31_RHOPR	T1HE37_RHOPR	T1HA31	T1HE37	Uncharacterized protein.	Uncharacterized protein.	0.953
T1HA31_RHOPR	T1I7V9_RHOPR	T1HA31	T1I7V9	Uncharacterized protein.	Microtubule-associated protein.	0.743
T1HA31_RHOPR	T1IBI5_RHOPR	T1HA31	T1IBI5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.981
T1HB14_RHOPR	R4G456_RHOPR	T1HB14	R4G456	Uncharacterized protein.	Putative acidic fibroblast growth factor binding fibp.	0.453
T1HB14_RHOPR	T1HB15_RHOPR	T1HB14	T1HB15	Uncharacterized protein.	Cyclin N-terminal domain-containing protein.	0.899
T1HB14_RHOPR	T1IBI5_RHOPR	T1HB14	T1IBI5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.863
T1HB15_RHOPR	R4G456_RHOPR	T1HB15	R4G456	Cyclin N-terminal domain-containing protein.	Putative acidic fibroblast growth factor binding fibp.	0.453
T1HB15_RHOPR	T1HB14_RHOPR	T1HB15	T1HB14	Cyclin N-terminal domain-containing protein.	Uncharacterized protein.	0.899
T1HB15_RHOPR	T1IBI5_RHOPR	T1HB15	T1IBI5	Cyclin N-terminal domain-containing protein.	Protein kinase domain-containing protein.	0.863
T1HE37_RHOPR	T1HA31_RHOPR	T1HE37	T1HA31	Uncharacterized protein.	Uncharacterized protein.	0.953
T1HE37_RHOPR	T1I7V9_RHOPR	T1HE37	T1I7V9	Uncharacterized protein.	Microtubule-associated protein.	0.743
T1HE37_RHOPR	T1IBI5_RHOPR	T1HE37	T1IBI5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.981
T1HGD1_RHOPR	R4G456_RHOPR	T1HGD1	R4G456	Cation_ATPase_C domain-containing protein.	Putative acidic fibroblast growth factor binding fibp.	0.779