(11 nodes) Papain family cysteine protease, and Saposin-like network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R4FQ93_RHOPR	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family. (335 aa)
	T1H8G8_RHOPR	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (364 aa)
	T1HF18_RHOPR	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (354 aa)
	T1HJE8_RHOPR	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (320 aa)
	T1HMP7_RHOPR	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (331 aa)
	T1HW30_RHOPR	Uncharacterized protein; Belongs to the peptidase C1 family. (328 aa)
	T1I278_RHOPR	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (338 aa)
	T1I611_RHOPR	Uncharacterized protein. (990 aa)
	T1I865_RHOPR	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (66 aa)
	T1IB57_RHOPR	Uncharacterized protein; Belongs to the peptidase C1 family. (325 aa)
	T1IG71_RHOPR	Uncharacterized protein; Belongs to the peptidase C1 family. (330 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4FQ93_RHOPR	T1HF18_RHOPR	R4FQ93	T1HF18	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.628
R4FQ93_RHOPR	T1HMP7_RHOPR	R4FQ93	T1HMP7	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.552
R4FQ93_RHOPR	T1HW30_RHOPR	R4FQ93	T1HW30	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.796
R4FQ93_RHOPR	T1I278_RHOPR	R4FQ93	T1I278	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.547
R4FQ93_RHOPR	T1I611_RHOPR	R4FQ93	T1I611	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.560
R4FQ93_RHOPR	T1IB57_RHOPR	R4FQ93	T1IB57	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.773
T1H8G8_RHOPR	T1HF18_RHOPR	T1H8G8	T1HF18	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.639
T1H8G8_RHOPR	T1HMP7_RHOPR	T1H8G8	T1HMP7	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.554
T1H8G8_RHOPR	T1HW30_RHOPR	T1H8G8	T1HW30	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.804
T1H8G8_RHOPR	T1I278_RHOPR	T1H8G8	T1I278	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.553
T1H8G8_RHOPR	T1I611_RHOPR	T1H8G8	T1I611	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.560
T1H8G8_RHOPR	T1IB57_RHOPR	T1H8G8	T1IB57	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.782
T1HF18_RHOPR	R4FQ93_RHOPR	T1HF18	R4FQ93	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Putative cathepsin l-like cysteine proteinase; Belongs to the peptidase C1 family.	0.628
T1HF18_RHOPR	T1H8G8_RHOPR	T1HF18	T1H8G8	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.639
T1HF18_RHOPR	T1HJE8_RHOPR	T1HF18	T1HJE8	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.497
T1HF18_RHOPR	T1HMP7_RHOPR	T1HF18	T1HMP7	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.694
T1HF18_RHOPR	T1HW30_RHOPR	T1HF18	T1HW30	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.742
T1HF18_RHOPR	T1I278_RHOPR	T1HF18	T1I278	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.689
T1HF18_RHOPR	T1I611_RHOPR	T1HF18	T1I611	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.582
T1HF18_RHOPR	T1I865_RHOPR	T1HF18	T1I865	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.497