(14 nodes) Mixed, incl. Nephrocyte diaphragm, and Epidermis morphogenesis network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1H7T7_RHOPR	Uncharacterized protein. (517 aa)
	T1HAM4_RHOPR	Uncharacterized protein. (1632 aa)
	T1HAM5_RHOPR	Uncharacterized protein. (296 aa)
	T1HHC5_RHOPR	Uncharacterized protein. (1234 aa)
	T1HID4_RHOPR	Uncharacterized protein. (156 aa)
	T1HID6_RHOPR	Uncharacterized protein. (610 aa)
	T1HJG2_RHOPR	Ig-like domain-containing protein. (135 aa)
	T1HNS4_RHOPR	Uncharacterized protein. (157 aa)
	T1HNT2_RHOPR	SH3 domain-containing protein. (152 aa)
	T1HNU1_RHOPR	Uncharacterized protein. (199 aa)
	T1HNU2_RHOPR	Uncharacterized protein. (466 aa)
	T1HY22_RHOPR	Uncharacterized protein. (1072 aa)
	T1HZR6_RHOPR	Uncharacterized protein. (84 aa)
	T1I5R3_RHOPR	Uncharacterized protein. (61 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1H7T7_RHOPR	T1HAM4_RHOPR	T1H7T7	T1HAM4	Uncharacterized protein.	Uncharacterized protein.	0.746
T1H7T7_RHOPR	T1HAM5_RHOPR	T1H7T7	T1HAM5	Uncharacterized protein.	Uncharacterized protein.	0.814
T1H7T7_RHOPR	T1HHC5_RHOPR	T1H7T7	T1HHC5	Uncharacterized protein.	Uncharacterized protein.	0.493
T1H7T7_RHOPR	T1HNT2_RHOPR	T1H7T7	T1HNT2	Uncharacterized protein.	SH3 domain-containing protein.	0.643
T1H7T7_RHOPR	T1HNU1_RHOPR	T1H7T7	T1HNU1	Uncharacterized protein.	Uncharacterized protein.	0.643
T1H7T7_RHOPR	T1HNU2_RHOPR	T1H7T7	T1HNU2	Uncharacterized protein.	Uncharacterized protein.	0.711
T1HAM4_RHOPR	T1H7T7_RHOPR	T1HAM4	T1H7T7	Uncharacterized protein.	Uncharacterized protein.	0.746
T1HAM4_RHOPR	T1HAM5_RHOPR	T1HAM4	T1HAM5	Uncharacterized protein.	Uncharacterized protein.	0.946
T1HAM4_RHOPR	T1HHC5_RHOPR	T1HAM4	T1HHC5	Uncharacterized protein.	Uncharacterized protein.	0.493
T1HAM4_RHOPR	T1HNT2_RHOPR	T1HAM4	T1HNT2	Uncharacterized protein.	SH3 domain-containing protein.	0.643
T1HAM4_RHOPR	T1HNU1_RHOPR	T1HAM4	T1HNU1	Uncharacterized protein.	Uncharacterized protein.	0.643
T1HAM4_RHOPR	T1HNU2_RHOPR	T1HAM4	T1HNU2	Uncharacterized protein.	Uncharacterized protein.	0.643
T1HAM5_RHOPR	T1H7T7_RHOPR	T1HAM5	T1H7T7	Uncharacterized protein.	Uncharacterized protein.	0.814
T1HAM5_RHOPR	T1HAM4_RHOPR	T1HAM5	T1HAM4	Uncharacterized protein.	Uncharacterized protein.	0.946
T1HAM5_RHOPR	T1HHC5_RHOPR	T1HAM5	T1HHC5	Uncharacterized protein.	Uncharacterized protein.	0.493
T1HAM5_RHOPR	T1HNT2_RHOPR	T1HAM5	T1HNT2	Uncharacterized protein.	SH3 domain-containing protein.	0.643
T1HAM5_RHOPR	T1HNU1_RHOPR	T1HAM5	T1HNU1	Uncharacterized protein.	Uncharacterized protein.	0.643
T1HAM5_RHOPR	T1HNU2_RHOPR	T1HAM5	T1HNU2	Uncharacterized protein.	Uncharacterized protein.	0.643
T1HHC5_RHOPR	T1H7T7_RHOPR	T1HHC5	T1H7T7	Uncharacterized protein.	Uncharacterized protein.	0.493
T1HHC5_RHOPR	T1HAM4_RHOPR	T1HHC5	T1HAM4	Uncharacterized protein.	Uncharacterized protein.	0.493