(16 nodes) Protein deneddylation, and VCB complex network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R4FJK1_RHOPR	Putative rna polymerase ii transcription elongation factor elongin/siii. (112 aa)
	R4FN08_RHOPR	Putative cop9 signalosome. (312 aa)
	R4G3M9_RHOPR	Putative cop9 signalosome. (266 aa)
	R4G461_RHOPR	Putative cop9 signalosome. (481 aa)
	R4G4T7_RHOPR	Putative cop9 complex subunit. (410 aa)
	R4G565_RHOPR	Putative cop9 signalosome. (182 aa)
	R4G868_RHOPR	Putative jun activation domain binding protein. (357 aa)
	T1HFP8_RHOPR	PCI domain-containing protein. (429 aa)
	T1HGK2_RHOPR	RING-type domain-containing protein. (112 aa)
	T1HN49_RHOPR	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (122 aa)
	T1I044_RHOPR	CULLIN_2 domain-containing protein; Belongs to the cullin family. (744 aa)
	T1I0W3_RHOPR	VHL domain-containing protein. (176 aa)
	T1I4K5_RHOPR	PCI domain-containing protein. (451 aa)
	T1I689_RHOPR	Alien, COP9 signalosome homolog 2. (444 aa)
	T1I877_RHOPR	Uncharacterized protein. (241 aa)
	T1IEZ0_RHOPR	Uncharacterized protein. (434 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4FJK1_RHOPR	R4FN08_RHOPR	R4FJK1	R4FN08	Putative rna polymerase ii transcription elongation factor elongin/siii.	Putative cop9 signalosome.	0.937
R4FJK1_RHOPR	R4G3M9_RHOPR	R4FJK1	R4G3M9	Putative rna polymerase ii transcription elongation factor elongin/siii.	Putative cop9 signalosome.	0.697
R4FJK1_RHOPR	R4G461_RHOPR	R4FJK1	R4G461	Putative rna polymerase ii transcription elongation factor elongin/siii.	Putative cop9 signalosome.	0.949
R4FJK1_RHOPR	R4G4T7_RHOPR	R4FJK1	R4G4T7	Putative rna polymerase ii transcription elongation factor elongin/siii.	Putative cop9 complex subunit.	0.928
R4FJK1_RHOPR	R4G565_RHOPR	R4FJK1	R4G565	Putative rna polymerase ii transcription elongation factor elongin/siii.	Putative cop9 signalosome.	0.872
R4FJK1_RHOPR	R4G868_RHOPR	R4FJK1	R4G868	Putative rna polymerase ii transcription elongation factor elongin/siii.	Putative jun activation domain binding protein.	0.926
R4FJK1_RHOPR	T1HFP8_RHOPR	R4FJK1	T1HFP8	Putative rna polymerase ii transcription elongation factor elongin/siii.	PCI domain-containing protein.	0.928
R4FJK1_RHOPR	T1HGK2_RHOPR	R4FJK1	T1HGK2	Putative rna polymerase ii transcription elongation factor elongin/siii.	RING-type domain-containing protein.	0.992
R4FJK1_RHOPR	T1HN49_RHOPR	R4FJK1	T1HN49	Putative rna polymerase ii transcription elongation factor elongin/siii.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.999
R4FJK1_RHOPR	T1I044_RHOPR	R4FJK1	T1I044	Putative rna polymerase ii transcription elongation factor elongin/siii.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.994
R4FJK1_RHOPR	T1I0W3_RHOPR	R4FJK1	T1I0W3	Putative rna polymerase ii transcription elongation factor elongin/siii.	VHL domain-containing protein.	0.992
R4FJK1_RHOPR	T1I4K5_RHOPR	R4FJK1	T1I4K5	Putative rna polymerase ii transcription elongation factor elongin/siii.	PCI domain-containing protein.	0.741
R4FJK1_RHOPR	T1I689_RHOPR	R4FJK1	T1I689	Putative rna polymerase ii transcription elongation factor elongin/siii.	Alien, COP9 signalosome homolog 2.	0.741
R4FJK1_RHOPR	T1I877_RHOPR	R4FJK1	T1I877	Putative rna polymerase ii transcription elongation factor elongin/siii.	Uncharacterized protein.	0.815
R4FJK1_RHOPR	T1IEZ0_RHOPR	R4FJK1	T1IEZ0	Putative rna polymerase ii transcription elongation factor elongin/siii.	Uncharacterized protein.	0.977
R4FN08_RHOPR	R4FJK1_RHOPR	R4FN08	R4FJK1	Putative cop9 signalosome.	Putative rna polymerase ii transcription elongation factor elongin/siii.	0.937
R4FN08_RHOPR	R4G3M9_RHOPR	R4FN08	R4G3M9	Putative cop9 signalosome.	Putative cop9 signalosome.	0.995
R4FN08_RHOPR	R4G461_RHOPR	R4FN08	R4G461	Putative cop9 signalosome.	Putative cop9 signalosome.	0.998
R4FN08_RHOPR	R4G4T7_RHOPR	R4FN08	R4G4T7	Putative cop9 signalosome.	Putative cop9 complex subunit.	0.999
R4FN08_RHOPR	R4G565_RHOPR	R4FN08	R4G565	Putative cop9 signalosome.	Putative cop9 signalosome.	0.998