(5 nodes) U4 snRNP network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R4FN48_RHOPR	Small nuclear ribonucleoprotein-associated protein. (208 aa)
	R4G8I5_RHOPR	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (122 aa)
	T1HJP8_RHOPR	Small nuclear ribonucleoprotein G. (76 aa)
	T1HSQ6_RHOPR	Small nuclear ribonucleoprotein Sm D2. (120 aa)
	T1IDT6_RHOPR	Small nuclear ribonucleoprotein Sm D3. (151 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4FN48_RHOPR	R4G8I5_RHOPR	R4FN48	R4G8I5	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
R4FN48_RHOPR	T1HJP8_RHOPR	R4FN48	T1HJP8	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein G.	0.999
R4FN48_RHOPR	T1HSQ6_RHOPR	R4FN48	T1HSQ6	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
R4FN48_RHOPR	T1IDT6_RHOPR	R4FN48	T1IDT6	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.995
R4G8I5_RHOPR	R4FN48_RHOPR	R4G8I5	R4FN48	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein-associated protein.	0.999
R4G8I5_RHOPR	T1HJP8_RHOPR	R4G8I5	T1HJP8	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
R4G8I5_RHOPR	T1HSQ6_RHOPR	R4G8I5	T1HSQ6	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
R4G8I5_RHOPR	T1IDT6_RHOPR	R4G8I5	T1IDT6	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.998
T1HJP8_RHOPR	R4FN48_RHOPR	T1HJP8	R4FN48	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein-associated protein.	0.999
T1HJP8_RHOPR	R4G8I5_RHOPR	T1HJP8	R4G8I5	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
T1HJP8_RHOPR	T1HSQ6_RHOPR	T1HJP8	T1HSQ6	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
T1HJP8_RHOPR	T1IDT6_RHOPR	T1HJP8	T1IDT6	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.999
T1HSQ6_RHOPR	R4FN48_RHOPR	T1HSQ6	R4FN48	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein-associated protein.	0.999
T1HSQ6_RHOPR	R4G8I5_RHOPR	T1HSQ6	R4G8I5	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
T1HSQ6_RHOPR	T1HJP8_RHOPR	T1HSQ6	T1HJP8	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein G.	0.999
T1HSQ6_RHOPR	T1IDT6_RHOPR	T1HSQ6	T1IDT6	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
T1IDT6_RHOPR	R4FN48_RHOPR	T1IDT6	R4FN48	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein-associated protein.	0.995
T1IDT6_RHOPR	R4G8I5_RHOPR	T1IDT6	R4G8I5	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.998
T1IDT6_RHOPR	T1HJP8_RHOPR	T1IDT6	T1HJP8	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.999
T1IDT6_RHOPR	T1HSQ6_RHOPR	T1IDT6	T1HSQ6	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D2.	0.999