5 items (Rhodnius prolixus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1HF77_RHOPR	Sec16_C domain-containing protein. (475 aa)
	R4G581_RHOPR	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	T1HWT2_RHOPR	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (128 aa)
	T1HWT0_RHOPR	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (375 aa)
	R4FNS0_RHOPR	Putative prolactin regulatory element-binding protein/protein transport protein sec12p. (430 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4FNS0_RHOPR	R4G581_RHOPR	R4FNS0	R4G581	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	0.997
R4FNS0_RHOPR	T1HF77_RHOPR	R4FNS0	T1HF77	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	Sec16_C domain-containing protein.	0.698
R4FNS0_RHOPR	T1HWT0_RHOPR	R4FNS0	T1HWT0	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.841
R4FNS0_RHOPR	T1HWT2_RHOPR	R4FNS0	T1HWT2	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.841
R4G581_RHOPR	R4FNS0_RHOPR	R4G581	R4FNS0	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	0.997
R4G581_RHOPR	T1HF77_RHOPR	R4G581	T1HF77	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	Sec16_C domain-containing protein.	0.946
R4G581_RHOPR	T1HWT0_RHOPR	R4G581	T1HWT0	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.981
R4G581_RHOPR	T1HWT2_RHOPR	R4G581	T1HWT2	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.981
T1HF77_RHOPR	R4FNS0_RHOPR	T1HF77	R4FNS0	Sec16_C domain-containing protein.	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	0.698
T1HF77_RHOPR	R4G581_RHOPR	T1HF77	R4G581	Sec16_C domain-containing protein.	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	0.946
T1HF77_RHOPR	T1HWT0_RHOPR	T1HF77	T1HWT0	Sec16_C domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.979
T1HF77_RHOPR	T1HWT2_RHOPR	T1HF77	T1HWT2	Sec16_C domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.979
T1HWT0_RHOPR	R4FNS0_RHOPR	T1HWT0	R4FNS0	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	0.841
T1HWT0_RHOPR	R4G581_RHOPR	T1HWT0	R4G581	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	0.981
T1HWT0_RHOPR	T1HF77_RHOPR	T1HWT0	T1HF77	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Sec16_C domain-containing protein.	0.979
T1HWT0_RHOPR	T1HWT2_RHOPR	T1HWT0	T1HWT2	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.933
T1HWT2_RHOPR	R4FNS0_RHOPR	T1HWT2	R4FNS0	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Putative prolactin regulatory element-binding protein/protein transport protein sec12p.	0.841
T1HWT2_RHOPR	R4G581_RHOPR	T1HWT2	R4G581	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Putative vesicle coat complex copii; Belongs to the small GTPase superfamily. SAR1 family.	0.981
T1HWT2_RHOPR	T1HF77_RHOPR	T1HWT2	T1HF77	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Sec16_C domain-containing protein.	0.979
T1HWT2_RHOPR	T1HWT0_RHOPR	T1HWT2	T1HWT0	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.933