(42 nodes) Positive regulation of cell cycle process network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1I0B7_RHOPR	Uncharacterized protein. (460 aa)
	R4FKB5_RHOPR	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (185 aa)
	T1H9K3_RHOPR	TYR_PHOSPHATASE_2 domain-containing protein. (251 aa)
	T1H9S7_RHOPR	TPR_MLP1_2 domain-containing protein. (1641 aa)
	T1HBB5_RHOPR	Protein kinase domain-containing protein. (289 aa)
	T1HDW3_RHOPR	TPR_REGION domain-containing protein. (515 aa)
	T1HEE1_RHOPR	F-box domain-containing protein. (544 aa)
	T1HEJ3_RHOPR	TPR_REGION domain-containing protein. (553 aa)
	T1HEL0_RHOPR	Uncharacterized protein. (779 aa)
	T1HFD3_RHOPR	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (327 aa)
	T1HHQ9_RHOPR	C2H2-type domain-containing protein. (145 aa)
	T1HKD0_RHOPR	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (239 aa)
	T1HLS0_RHOPR	Uncharacterized protein. (494 aa)
	T1HLS1_RHOPR	Uncharacterized protein. (140 aa)
	T1HMA4_RHOPR	ALMS_motif domain-containing protein. (326 aa)
	T1HMA5_RHOPR	Uncharacterized protein. (611 aa)
	T1HMR1_RHOPR	Uncharacterized protein. (778 aa)
	T1HP56_RHOPR	Uncharacterized protein. (310 aa)
	T1HPN3_RHOPR	Uncharacterized protein. (1117 aa)
	T1HQF9_RHOPR	SEP domain-containing protein. (372 aa)
	T1HQP1_RHOPR	Uncharacterized protein. (517 aa)
	T1HST5_RHOPR	CYCLIN domain-containing protein; Belongs to the cyclin family. (216 aa)
	T1HSZ2_RHOPR	Uncharacterized protein. (983 aa)
	T1HTH2_RHOPR	Uncharacterized protein. (836 aa)
	T1HTV7_RHOPR	Uncharacterized protein. (249 aa)
	T1HTX8_RHOPR	Uncharacterized protein. (167 aa)
	T1HVI8_RHOPR	Uncharacterized protein. (1890 aa)
	T1HWK9_RHOPR	Supernumerary limbs. (509 aa)
	T1HWQ2_RHOPR	Rhodanese domain-containing protein. (148 aa)
	T1HZZ6_RHOPR	Uncharacterized protein. (432 aa)
	T1I136_RHOPR	DBF4-type domain-containing protein. (1013 aa)
	T1I1S9_RHOPR	TPR_REGION domain-containing protein. (768 aa)
	T1I3K6_RHOPR	Uncharacterized protein. (494 aa)
	T1I3U9_RHOPR	Uncharacterized protein. (2648 aa)
	T1I4F7_RHOPR	Leishmanolysin-like peptidase. (330 aa)
	T1I4F8_RHOPR	Leishmanolysin-like peptidase. (256 aa)
	T1I6C3_RHOPR	DUF3668 domain-containing protein. (700 aa)
	T1I6M1_RHOPR	Uncharacterized protein. (144 aa)
	T1I9B5_RHOPR	Uncharacterized protein. (219 aa)
	T1I9X7_RHOPR	Protein kinase domain-containing protein. (254 aa)
	T1ID84_RHOPR	Uncharacterized protein. (438 aa)
	T1IED3_RHOPR	Uncharacterized protein. (431 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4FKB5_RHOPR	T1H9K3_RHOPR	R4FKB5	T1H9K3	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	TYR_PHOSPHATASE_2 domain-containing protein.	0.403
R4FKB5_RHOPR	T1HBB5_RHOPR	R4FKB5	T1HBB5	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Protein kinase domain-containing protein.	0.952
R4FKB5_RHOPR	T1HDW3_RHOPR	R4FKB5	T1HDW3	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	TPR_REGION domain-containing protein.	0.991
R4FKB5_RHOPR	T1HEJ3_RHOPR	R4FKB5	T1HEJ3	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	TPR_REGION domain-containing protein.	0.994
R4FKB5_RHOPR	T1HMR1_RHOPR	R4FKB5	T1HMR1	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.991
R4FKB5_RHOPR	T1HQP1_RHOPR	R4FKB5	T1HQP1	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.493
R4FKB5_RHOPR	T1HWK9_RHOPR	R4FKB5	T1HWK9	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Supernumerary limbs.	0.601
R4FKB5_RHOPR	T1I1S9_RHOPR	R4FKB5	T1I1S9	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	TPR_REGION domain-containing protein.	0.993
R4FKB5_RHOPR	T1I3K6_RHOPR	R4FKB5	T1I3K6	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.450
R4FKB5_RHOPR	T1I9X7_RHOPR	R4FKB5	T1I9X7	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Protein kinase domain-containing protein.	0.937
T1H9K3_RHOPR	R4FKB5_RHOPR	T1H9K3	R4FKB5	TYR_PHOSPHATASE_2 domain-containing protein.	Putative ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.403
T1H9K3_RHOPR	T1HDW3_RHOPR	T1H9K3	T1HDW3	TYR_PHOSPHATASE_2 domain-containing protein.	TPR_REGION domain-containing protein.	0.857
T1H9K3_RHOPR	T1HEJ3_RHOPR	T1H9K3	T1HEJ3	TYR_PHOSPHATASE_2 domain-containing protein.	TPR_REGION domain-containing protein.	0.856
T1H9K3_RHOPR	T1HFD3_RHOPR	T1H9K3	T1HFD3	TYR_PHOSPHATASE_2 domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.620
T1H9K3_RHOPR	T1HKD0_RHOPR	T1H9K3	T1HKD0	TYR_PHOSPHATASE_2 domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.620
T1H9K3_RHOPR	T1HMR1_RHOPR	T1H9K3	T1HMR1	TYR_PHOSPHATASE_2 domain-containing protein.	Uncharacterized protein.	0.793
T1H9K3_RHOPR	T1HWQ2_RHOPR	T1H9K3	T1HWQ2	TYR_PHOSPHATASE_2 domain-containing protein.	Rhodanese domain-containing protein.	0.923
T1H9K3_RHOPR	T1I1S9_RHOPR	T1H9K3	T1I1S9	TYR_PHOSPHATASE_2 domain-containing protein.	TPR_REGION domain-containing protein.	0.865
T1H9K3_RHOPR	T1I9X7_RHOPR	T1H9K3	T1I9X7	TYR_PHOSPHATASE_2 domain-containing protein.	Protein kinase domain-containing protein.	0.600
T1H9S7_RHOPR	T1I9X7_RHOPR	T1H9S7	T1I9X7	TPR_MLP1_2 domain-containing protein.	Protein kinase domain-containing protein.	0.461