(5 nodes) ELO family, conserved site network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1H945_RHOPR	Elongation of very long chain fatty acids protein. (249 aa)
	R4G3B9_RHOPR	Elongation of very long chain fatty acids protein. (291 aa)
	T1IFX7_RHOPR	Elongation of very long chain fatty acids protein. (259 aa)
	T1IE92_RHOPR	Elongation of very long chain fatty acids protein. (276 aa)
	R4G3C3_RHOPR	Elongation of very long chain fatty acids protein. (326 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4G3B9_RHOPR	R4G3C3_RHOPR	R4G3B9	R4G3C3	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.606
R4G3B9_RHOPR	T1H945_RHOPR	R4G3B9	T1H945	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.660
R4G3B9_RHOPR	T1IE92_RHOPR	R4G3B9	T1IE92	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.498
R4G3B9_RHOPR	T1IFX7_RHOPR	R4G3B9	T1IFX7	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.782
R4G3C3_RHOPR	R4G3B9_RHOPR	R4G3C3	R4G3B9	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.606
R4G3C3_RHOPR	T1H945_RHOPR	R4G3C3	T1H945	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.611
R4G3C3_RHOPR	T1IFX7_RHOPR	R4G3C3	T1IFX7	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.603
T1H945_RHOPR	R4G3B9_RHOPR	T1H945	R4G3B9	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.660
T1H945_RHOPR	R4G3C3_RHOPR	T1H945	R4G3C3	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.611
T1H945_RHOPR	T1IFX7_RHOPR	T1H945	T1IFX7	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.773
T1IE92_RHOPR	R4G3B9_RHOPR	T1IE92	R4G3B9	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.498
T1IFX7_RHOPR	R4G3B9_RHOPR	T1IFX7	R4G3B9	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.782
T1IFX7_RHOPR	R4G3C3_RHOPR	T1IFX7	R4G3C3	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.603
T1IFX7_RHOPR	T1H945_RHOPR	T1IFX7	T1H945	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.773