(19 nodes) Apoptosis - multiple species network (Rhodnius prolixus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1HU71_RHOPR	Mitogen-activated protein kinase. (389 aa)
	T1IFQ6_RHOPR	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (360 aa)
	T1IEN4_RHOPR	DUF4203 domain-containing protein. (250 aa)
	T1I8J1_RHOPR	PDZ domain-containing protein. (342 aa)
	T1I4B0_RHOPR	Uncharacterized protein; Belongs to the peptidase C14A family. (427 aa)
	T1I443_RHOPR	Uncharacterized protein. (76 aa)
	T1I393_RHOPR	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family. (289 aa)
	T1HZX5_RHOPR	PDZ domain-containing protein. (323 aa)
	T1HXK1_RHOPR	Uncharacterized protein. (215 aa)
	T1HSP8_RHOPR	RING-type domain-containing protein. (524 aa)
	T1HQW9_RHOPR	Uncharacterized protein. (312 aa)
	T1HKX7_RHOPR	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (106 aa)
	T1HKF7_RHOPR	TNFR-Cys domain-containing protein. (497 aa)
	T1HIT2_RHOPR	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (53 aa)
	T1HIS3_RHOPR	Uncharacterized protein; Belongs to the peptidase C14A family. (257 aa)
	T1HE81_RHOPR	APG6 domain-containing protein. (112 aa)
	T1HDI4_RHOPR	Uncharacterized protein. (1128 aa)
	T1HCP5_RHOPR	RING-type domain-containing protein. (373 aa)
	R4G8I1_RHOPR	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (108 aa)

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4G8I1_RHOPR	T1HCP5_RHOPR	R4G8I1	T1HCP5	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	RING-type domain-containing protein.	0.653
R4G8I1_RHOPR	T1HDI4_RHOPR	R4G8I1	T1HDI4	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.998
R4G8I1_RHOPR	T1HIS3_RHOPR	R4G8I1	T1HIS3	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.774
R4G8I1_RHOPR	T1HSP8_RHOPR	R4G8I1	T1HSP8	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	RING-type domain-containing protein.	0.653
R4G8I1_RHOPR	T1HXK1_RHOPR	R4G8I1	T1HXK1	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.855
R4G8I1_RHOPR	T1HZX5_RHOPR	R4G8I1	T1HZX5	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	PDZ domain-containing protein.	0.700
R4G8I1_RHOPR	T1I393_RHOPR	R4G8I1	T1I393	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	0.780
R4G8I1_RHOPR	T1I4B0_RHOPR	R4G8I1	T1I4B0	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.774
R4G8I1_RHOPR	T1I8J1_RHOPR	R4G8I1	T1I8J1	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	PDZ domain-containing protein.	0.700
R4G8I1_RHOPR	T1IEN4_RHOPR	R4G8I1	T1IEN4	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	DUF4203 domain-containing protein.	0.748
T1HCP5_RHOPR	R4G8I1_RHOPR	T1HCP5	R4G8I1	RING-type domain-containing protein.	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.653
T1HCP5_RHOPR	T1HDI4_RHOPR	T1HCP5	T1HDI4	RING-type domain-containing protein.	Uncharacterized protein.	0.814
T1HCP5_RHOPR	T1HIS3_RHOPR	T1HCP5	T1HIS3	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.988
T1HCP5_RHOPR	T1HIT2_RHOPR	T1HCP5	T1HIT2	RING-type domain-containing protein.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.794
T1HCP5_RHOPR	T1HKX7_RHOPR	T1HCP5	T1HKX7	RING-type domain-containing protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.653
T1HCP5_RHOPR	T1HSP8_RHOPR	T1HCP5	T1HSP8	RING-type domain-containing protein.	RING-type domain-containing protein.	0.949
T1HCP5_RHOPR	T1HZX5_RHOPR	T1HCP5	T1HZX5	RING-type domain-containing protein.	PDZ domain-containing protein.	0.870
T1HCP5_RHOPR	T1I393_RHOPR	T1HCP5	T1I393	RING-type domain-containing protein.	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	0.997
T1HCP5_RHOPR	T1I443_RHOPR	T1HCP5	T1I443	RING-type domain-containing protein.	Uncharacterized protein.	0.699
T1HCP5_RHOPR	T1I4B0_RHOPR	T1HCP5	T1I4B0	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.994