STRINGSTRING
pyrF pyrF carA carA upp upp purF purF purD purD pyrD pyrD apt apt pyrB pyrB carA-2 carA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pyrFUnannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (237 aa)
carAUnannotated protein; Belongs to the CarA family. (355 aa)
uppUnannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (209 aa)
purFUnannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (475 aa)
purDUnannotated protein; Belongs to the GARS family. (426 aa)
pyrDUnannotated protein; Catalyzes the conversion of dihydroorotate to orotate. (312 aa)
aptUnannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (170 aa)
pyrBUnannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (307 aa)
carA-2Unannotated protein; Belongs to the CarA family. (364 aa)
Your Current Organism:
Anoxybacillus suryakundensis
NCBI taxonomy Id: 1325335
Other names: A. suryakundensis, Anoxybacillus sp. JS1, Anoxybacillus sp. JS11, Anoxybacillus sp. JS15, Anoxybacillus sp. JS5, DSM 27374, JCM19211, LMG 27616, LMG:27616, strain JS1
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