(27 nodes) Processing of Intronless Pre-mRNAs, and Regulation of termination of RNA polymerase II transcription network (Fusarium sp. AF6)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

Your Input:
	CEP53_015358	Uncharacterized protein. (336 aa)
	CEP53_015231	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (308 aa)
	CEP53_014786	RING-type domain-containing protein. (902 aa)
	CEP53_014434	RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (255 aa)
	CEP53_014378	mRNA 3'-end-processing protein RNA14. (980 aa)
	CEP53_013412	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (264 aa)
	CEP53_013041	Endoribonuclease YSH1. (827 aa)
	CEP53_011681	YTH domain-containing protein. (623 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (451 aa)
	CEP53_010665	RRM domain-containing protein. (294 aa)
	CEP53_010430	DUF3453 domain-containing protein. (718 aa)
	CEP53_010076	Cleavage and polyadenylation specificity factor subunit 2. (958 aa)
	CEP53_009951	Uncharacterized protein. (604 aa)
	CEP53_009537	WD_REPEATS_REGION domain-containing protein. (382 aa)
	CEP53_009087	Uncharacterized protein. (119 aa)
	CEP53_008804	Polyadenylation factor subunit 2. (615 aa)
	CEP53_008731	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (612 aa)
	CEP53_007863	Uncharacterized protein. (620 aa)
	CEP53_007146	mRNA 3'-end-processing protein YTH1. (260 aa)
	CEP53_007147	Uncharacterized protein. (385 aa)
	CEP53_006355	Pre-mRNA polyadenylation factor FIP1. (332 aa)
	CEP53_005001	Protein cft1. (1318 aa)
	CEP53_004148	Uncharacterized protein. (663 aa)
	CEP53_003988	Uncharacterized protein. (295 aa)
	CEP53_003911	Uncharacterized protein. (421 aa)
	CEP53_003116	Uncharacterized protein. (341 aa)
	CEP53_001615	Uncharacterized protein. (926 aa)

Your Current Organism:

Fusarium sp. AF6

NCBI taxonomy Id: 1325737
Other names: F. sp. AF-6, Fusarium sp. AF-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP53_001615	CEP53_003911	A0A428R143	A0A428QHS3	Uncharacterized protein.	Uncharacterized protein.	0.495
CEP53_001615	CEP53_004148	A0A428R143	A0A428QG27	Uncharacterized protein.	Uncharacterized protein.	0.778
CEP53_001615	CEP53_005001	A0A428R143	A0A428Q8Q7	Uncharacterized protein.	Protein cft1.	0.969
CEP53_001615	CEP53_006355	A0A428R143	A0A428PXS9	Uncharacterized protein.	Pre-mRNA polyadenylation factor FIP1.	0.964
CEP53_001615	CEP53_007146	A0A428R143	A0A428PQJ6	Uncharacterized protein.	mRNA 3'-end-processing protein YTH1.	0.843
CEP53_001615	CEP53_007147	A0A428R143	A0A428PQP1	Uncharacterized protein.	Uncharacterized protein.	0.843
CEP53_001615	CEP53_008731	A0A428R143	A0A428PC29	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.681
CEP53_001615	CEP53_008804	A0A428R143	A0A428PBV2	Uncharacterized protein.	Polyadenylation factor subunit 2.	0.967
CEP53_001615	CEP53_009087	A0A428R143	A0A428P9G5	Uncharacterized protein.	Uncharacterized protein.	0.495
CEP53_001615	CEP53_009537	A0A428R143	A0A428P619	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.961
CEP53_001615	CEP53_009951	A0A428R143	A0A428P327	Uncharacterized protein.	Uncharacterized protein.	0.495
CEP53_001615	CEP53_010076	A0A428R143	A0A428P228	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.969
CEP53_001615	CEP53_010430	A0A428R143	A0A428NZR4	Uncharacterized protein.	DUF3453 domain-containing protein.	0.904
CEP53_001615	CEP53_010665	A0A428R143	A0A428NY77	Uncharacterized protein.	RRM domain-containing protein.	0.495
CEP53_001615	CEP53_011681	A0A428R143	A0A428NRW7	Uncharacterized protein.	YTH domain-containing protein.	0.977
CEP53_001615	CEP53_013041	A0A428R143	A0A428NJM0	Uncharacterized protein.	Endoribonuclease YSH1.	0.969
CEP53_001615	CEP53_014378	A0A428R143	A0A428NE03	Uncharacterized protein.	mRNA 3'-end-processing protein RNA14.	0.683
CEP53_001615	CEP53_014434	A0A428R143	A0A428NDW5	Uncharacterized protein.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.961
CEP53_001615	CEP53_015231	A0A428R143	A0A428NB74	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.757
CEP53_001615	CEP53_015358	A0A428R143	A0A428NAW1	Uncharacterized protein.	Uncharacterized protein.	0.681