(7 nodes) Nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts network (Fusarium sp. AF6)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CEP53_007638	C3H1-type domain-containing protein. (1136 aa)
	CEP53_015358	Uncharacterized protein. (336 aa)
	CEP53_012063	HRDC domain-containing protein. (820 aa)
	CEP53_010505	CULLIN_2 domain-containing protein; Belongs to the cullin family. (795 aa)
	CEP53_008731	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (612 aa)
	CEP53_003469	Uncharacterized protein. (449 aa)
	CEP53_005581	Uncharacterized protein. (901 aa)

Your Current Organism:

Fusarium sp. AF6

NCBI taxonomy Id: 1325737
Other names: F. sp. AF-6, Fusarium sp. AF-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP53_003469	CEP53_007638	A0A428QLI5	A0A428PL43	Uncharacterized protein.	C3H1-type domain-containing protein.	0.561
CEP53_005581	CEP53_007638	A0A428Q3U6	A0A428PL43	Uncharacterized protein.	C3H1-type domain-containing protein.	0.884
CEP53_005581	CEP53_012063	A0A428Q3U6	A0A428NPH2	Uncharacterized protein.	HRDC domain-containing protein.	0.400
CEP53_007638	CEP53_003469	A0A428PL43	A0A428QLI5	C3H1-type domain-containing protein.	Uncharacterized protein.	0.561
CEP53_007638	CEP53_005581	A0A428PL43	A0A428Q3U6	C3H1-type domain-containing protein.	Uncharacterized protein.	0.884
CEP53_007638	CEP53_008731	A0A428PL43	A0A428PC29	C3H1-type domain-containing protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.884
CEP53_007638	CEP53_012063	A0A428PL43	A0A428NPH2	C3H1-type domain-containing protein.	HRDC domain-containing protein.	0.619
CEP53_007638	CEP53_015358	A0A428PL43	A0A428NAW1	C3H1-type domain-containing protein.	Uncharacterized protein.	0.884
CEP53_008731	CEP53_007638	A0A428PC29	A0A428PL43	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	C3H1-type domain-containing protein.	0.884
CEP53_008731	CEP53_012063	A0A428PC29	A0A428NPH2	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	HRDC domain-containing protein.	0.400
CEP53_012063	CEP53_005581	A0A428NPH2	A0A428Q3U6	HRDC domain-containing protein.	Uncharacterized protein.	0.400
CEP53_012063	CEP53_007638	A0A428NPH2	A0A428PL43	HRDC domain-containing protein.	C3H1-type domain-containing protein.	0.619
CEP53_012063	CEP53_008731	A0A428NPH2	A0A428PC29	HRDC domain-containing protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.400
CEP53_012063	CEP53_015358	A0A428NPH2	A0A428NAW1	HRDC domain-containing protein.	Uncharacterized protein.	0.400
CEP53_015358	CEP53_007638	A0A428NAW1	A0A428PL43	Uncharacterized protein.	C3H1-type domain-containing protein.	0.884
CEP53_015358	CEP53_012063	A0A428NAW1	A0A428NPH2	Uncharacterized protein.	HRDC domain-containing protein.	0.400