STRINGSTRING
CEP53_000047 CEP53_000047 CEP53_005253 CEP53_005253 CEP53_004683 CEP53_004683 CEP53_004604 CEP53_004604 CEP53_004101 CEP53_004101 CEP53_014798 CEP53_014798 CEP53_014631 CEP53_014631 CEP53_014618 CEP53_014618 PAN3 PAN3 CEP53_011945 CEP53_011945 CEP53_011402 CEP53_011402 CEP53_011155 CEP53_011155 CEP53_011008 CEP53_011008 CEP53_008538 CEP53_008538 CEP53_008053 CEP53_008053 CEP53_007844 CEP53_007844 CEP53_007638 CEP53_007638 CEP53_007146 CEP53_007146 CEP53_006132 CEP53_006132 CEP53_004040 CEP53_004040 CEP53_003469 CEP53_003469 CEP53_002308 CEP53_002308 CEP53_002099 CEP53_002099 CEP53_000677 CEP53_000677
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CEP53_000047C3H1-type domain-containing protein. (485 aa)
CEP53_005253C3H1-type domain-containing protein. (834 aa)
CEP53_004683C3H1-type domain-containing protein. (790 aa)
CEP53_004604Uncharacterized protein. (172 aa)
CEP53_004101C3H1-type domain-containing protein. (607 aa)
CEP53_014798C3H1-type domain-containing protein. (364 aa)
CEP53_014631Uncharacterized protein. (378 aa)
CEP53_014618C3H1-type domain-containing protein. (409 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (638 aa)
CEP53_011945Uncharacterized protein. (486 aa)
CEP53_011402Uncharacterized protein. (568 aa)
CEP53_011155Splicing factor U2AF 23 kDa subunit. (209 aa)
CEP53_011008C3H1-type domain-containing protein. (1875 aa)
CEP53_008538C3H1-type domain-containing protein. (291 aa)
CEP53_008053Uncharacterized protein. (707 aa)
CEP53_007844Pre-mRNA-splicing factor CWC2. (399 aa)
CEP53_007638C3H1-type domain-containing protein. (1136 aa)
CEP53_007146mRNA 3'-end-processing protein YTH1. (260 aa)
CEP53_006132C3H1-type domain-containing protein. (265 aa)
CEP53_004040Uncharacterized protein. (330 aa)
CEP53_003469Uncharacterized protein. (449 aa)
CEP53_002308C3H1-type domain-containing protein. (568 aa)
CEP53_002099tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs. (767 aa)
CEP53_000677C3H1-type domain-containing protein. (1449 aa)
Your Current Organism:
Fusarium sp. AF6
NCBI taxonomy Id: 1325737
Other names: F. sp. AF-6, Fusarium sp. AF-6
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