5 items (Streptococcus acidominimus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OLF49921.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
	OLF50714.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
	OLF49241.1	Cell wall metabolism sensor histidine kinase VicK; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
	mnmE	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (457 aa)
	OLF50789.1	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa)

Your Current Organism:

Streptococcus acidominimus

NCBI taxonomy Id: 1326
Other names: ATCC 51725, CCUG 27296, CIP 82.4, DSM 20622, LMG 17755, LMG:17755, NCDO 2025, NCIMB 702025, NCTC 12957, S. acidominimus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OLF49241.1	OLF49921.1	BU200_08420	BU200_04925	Cell wall metabolism sensor histidine kinase VicK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
OLF49241.1	OLF50714.1	BU200_08420	BU200_00580	Cell wall metabolism sensor histidine kinase VicK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
OLF49921.1	OLF49241.1	BU200_04925	BU200_08420	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell wall metabolism sensor histidine kinase VicK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
OLF49921.1	OLF50714.1	BU200_04925	BU200_00580	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
OLF49921.1	OLF50789.1	BU200_04925	BU200_00175	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
OLF50714.1	OLF49241.1	BU200_00580	BU200_08420	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell wall metabolism sensor histidine kinase VicK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
OLF50714.1	OLF49921.1	BU200_00580	BU200_04925	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
OLF50714.1	OLF50789.1	BU200_00580	BU200_00175	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
OLF50789.1	OLF49921.1	BU200_00175	BU200_04925	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
OLF50789.1	OLF50714.1	BU200_00175	BU200_00580	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683