STRINGSTRING
L486_07857 L486_07857 L486_06429 L486_06429 L486_05692 L486_05692 L486_04038 L486_04038 L486_03263 L486_03263 SUS1 SUS1 L486_02234 L486_02234 L486_02546 L486_02546 L486_02973 L486_02973 L486_00323 L486_00323 L486_01231 L486_01231
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
L486_07857Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3725 aa)
L486_06429Bromo domain-containing protein. (833 aa)
L486_05692SAGA-associated factor 29. (359 aa)
L486_04038Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (608 aa)
L486_03263Uncharacterized protein. (614 aa)
SUS1Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (100 aa)
L486_02234Transcription initiation factor TFIID subunit 9B. (214 aa)
L486_02546Transcription initiation protein SPT3. (415 aa)
L486_02973Ubiquitinyl hydrolase 1. (644 aa)
L486_00323Histone acetyltransferase. (913 aa)
L486_01231SCA7 domain-containing protein. (461 aa)
Your Current Organism:
Kwoniella mangroviensis
NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435
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