STRINGSTRING
L486_03765 L486_03765 L486_00060 L486_00060 L486_00077 L486_00077 L486_00391 L486_00391 L486_00495 L486_00495 L486_00743 L486_00743 L486_01109 L486_01109 L486_08445 L486_08445 L486_08311 L486_08311 L486_08043 L486_08043 L486_07573 L486_07573 L486_07668 L486_07668 L486_06752 L486_06752 L486_06136 L486_06136 LSM4 LSM4 L486_07167 L486_07167 L486_05725 L486_05725 L486_05837 L486_05837
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
L486_03765Uncharacterized protein. (336 aa)
L486_00060Pre-mRNA-processing-splicing factor 8. (2374 aa)
L486_00077Pre-mRNA-processing factor 6. (940 aa)
L486_00391Uncharacterized protein. (413 aa)
L486_00495zf-U1 domain-containing protein. (212 aa)
L486_00743Pre-mRNA-splicing factor CWC2. (361 aa)
L486_01109Uncharacterized protein. (712 aa)
L486_08445Small nuclear ribonucleoprotein G. (62 aa)
L486_08311Small nuclear ribonucleoprotein Sm D2. (111 aa)
L486_08043Uncharacterized protein. (174 aa)
L486_07573Small nuclear ribonucleoprotein F. (84 aa)
L486_07668U5 small nuclear ribonucleoprotein component. (993 aa)
L486_06752U4/U6 small nuclear ribonucleoprotein PRP31. (570 aa)
L486_06136Tudor domain-containing protein. (244 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (157 aa)
L486_07167Serine-threonine kinase receptor-associated protein. (346 aa)
L486_05725Uncharacterized protein. (1103 aa)
L486_05837Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
Your Current Organism:
Kwoniella mangroviensis
NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435
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