19 items (Kwoniella mangroviensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L486_01072	Splicing factor 3B subunit 1. (1140 aa)
	L486_07993	HIV Tat-specific factor 1. (407 aa)
	L486_08003	PHD finger-like domain-containing protein 5B. (107 aa)
	L486_07502	Splicing factor 3A subunit 2. (219 aa)
	L486_07573	Small nuclear ribonucleoprotein F. (84 aa)
	L486_06913	Splicing factor 3B subunit 5. (134 aa)
	L486_06268	U2 small nuclear ribonucleoprotein A. (259 aa)
	L486_01744	Pre-mRNA branch site protein p14. (120 aa)
	L486_07986	U2-associated protein SR140. (777 aa)
	L486_08311	Small nuclear ribonucleoprotein Sm D2. (111 aa)
	L486_08445	Small nuclear ribonucleoprotein G. (62 aa)
	L486_00530	Splicing factor 3B subunit 4. (320 aa)
	L486_02773	Pre-mRNA-splicing factor RSE1. (1216 aa)
	L486_02467	Bud site selection protein 31. (148 aa)
	L486_03059	Small nuclear ribonucleoprotein B and B. (209 aa)
	L486_04599	Splicing factor 3A subunit 1. (772 aa)
	L486_05837	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	L486_00835	Splicing factor 3B subunit 2. (610 aa)
	L486_00858	RNA-binding domain-containing protein, X-linked 2. (361 aa)

Your Current Organism:

Kwoniella mangroviensis

NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L486_00530	L486_00835	A0A1B9IZC7	A0A1B9J080	Splicing factor 3B subunit 4.	Splicing factor 3B subunit 2.	0.999
L486_00530	L486_00858	A0A1B9IZC7	A0A1B9J0C7	Splicing factor 3B subunit 4.	RNA-binding domain-containing protein, X-linked 2.	0.986
L486_00530	L486_01072	A0A1B9IZC7	A0A1B9J1A2	Splicing factor 3B subunit 4.	Splicing factor 3B subunit 1.	0.999
L486_00530	L486_01744	A0A1B9IZC7	A0A1B9J2S0	Splicing factor 3B subunit 4.	Pre-mRNA branch site protein p14.	0.998
L486_00530	L486_02467	A0A1B9IZC7	A0A1B9IWJ0	Splicing factor 3B subunit 4.	Bud site selection protein 31.	0.896
L486_00530	L486_02773	A0A1B9IZC7	A0A1B9IX33	Splicing factor 3B subunit 4.	Pre-mRNA-splicing factor RSE1.	0.999
L486_00530	L486_03059	A0A1B9IZC7	A0A1B9ISQ3	Splicing factor 3B subunit 4.	Small nuclear ribonucleoprotein B and B.	0.993
L486_00530	L486_04599	A0A1B9IZC7	A0A1B9IP50	Splicing factor 3B subunit 4.	Splicing factor 3A subunit 1.	0.996
L486_00530	L486_05837	A0A1B9IZC7	A0A1B9ING1	Splicing factor 3B subunit 4.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.971
L486_00530	L486_06268	A0A1B9IZC7	A0A1B9IL16	Splicing factor 3B subunit 4.	U2 small nuclear ribonucleoprotein A.	0.995
L486_00530	L486_06913	A0A1B9IZC7	A0A1B9IJ78	Splicing factor 3B subunit 4.	Splicing factor 3B subunit 5.	0.998
L486_00530	L486_07502	A0A1B9IZC7	A0A1B9IHD0	Splicing factor 3B subunit 4.	Splicing factor 3A subunit 2.	0.997
L486_00530	L486_07573	A0A1B9IZC7	A0A1B9IHJ5	Splicing factor 3B subunit 4.	Small nuclear ribonucleoprotein F.	0.963
L486_00530	L486_07986	A0A1B9IZC7	A0A1B9IFH9	Splicing factor 3B subunit 4.	U2-associated protein SR140.	0.719
L486_00530	L486_07993	A0A1B9IZC7	A0A1B9IFV4	Splicing factor 3B subunit 4.	HIV Tat-specific factor 1.	0.790
L486_00530	L486_08003	A0A1B9IZC7	A0A1B9IFW3	Splicing factor 3B subunit 4.	PHD finger-like domain-containing protein 5B.	0.998
L486_00530	L486_08311	A0A1B9IZC7	A0A1B9IF76	Splicing factor 3B subunit 4.	Small nuclear ribonucleoprotein Sm D2.	0.966
L486_00530	L486_08445	A0A1B9IZC7	A0A1B9IET6	Splicing factor 3B subunit 4.	Small nuclear ribonucleoprotein G.	0.966
L486_00835	L486_00530	A0A1B9J080	A0A1B9IZC7	Splicing factor 3B subunit 2.	Splicing factor 3B subunit 4.	0.999
L486_00835	L486_00858	A0A1B9J080	A0A1B9J0C7	Splicing factor 3B subunit 2.	RNA-binding domain-containing protein, X-linked 2.	0.987