6 items (Kwoniella mangroviensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L486_06670	Brg1-associated factor b; Belongs to the actin family. (474 aa)
	L486_07960	Uncharacterized protein. (173 aa)
	L486_04789	Uncharacterized protein. (693 aa)
	L486_04559	Uncharacterized protein. (1769 aa)
	L486_00219	ARID domain-containing protein. (1199 aa)
	L486_01861	SWIB domain-containing protein. (481 aa)

Your Current Organism:

Kwoniella mangroviensis

NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L486_00219	L486_01861	A0A1B9IYU1	A0A1B9J3F2	ARID domain-containing protein.	SWIB domain-containing protein.	0.895
L486_00219	L486_04559	A0A1B9IYU1	A0A1B9ISM0	ARID domain-containing protein.	Uncharacterized protein.	0.959
L486_00219	L486_04789	A0A1B9IYU1	A0A1B9IP59	ARID domain-containing protein.	Uncharacterized protein.	0.900
L486_00219	L486_06670	A0A1B9IYU1	A0A1B9IKL9	ARID domain-containing protein.	Brg1-associated factor b; Belongs to the actin family.	0.752
L486_01861	L486_00219	A0A1B9J3F2	A0A1B9IYU1	SWIB domain-containing protein.	ARID domain-containing protein.	0.895
L486_01861	L486_04559	A0A1B9J3F2	A0A1B9ISM0	SWIB domain-containing protein.	Uncharacterized protein.	0.994
L486_01861	L486_04789	A0A1B9J3F2	A0A1B9IP59	SWIB domain-containing protein.	Uncharacterized protein.	0.998
L486_01861	L486_06670	A0A1B9J3F2	A0A1B9IKL9	SWIB domain-containing protein.	Brg1-associated factor b; Belongs to the actin family.	0.992
L486_01861	L486_07960	A0A1B9J3F2	A0A1B9IFX9	SWIB domain-containing protein.	Uncharacterized protein.	0.982
L486_04559	L486_00219	A0A1B9ISM0	A0A1B9IYU1	Uncharacterized protein.	ARID domain-containing protein.	0.959
L486_04559	L486_01861	A0A1B9ISM0	A0A1B9J3F2	Uncharacterized protein.	SWIB domain-containing protein.	0.994
L486_04559	L486_04789	A0A1B9ISM0	A0A1B9IP59	Uncharacterized protein.	Uncharacterized protein.	0.999
L486_04559	L486_06670	A0A1B9ISM0	A0A1B9IKL9	Uncharacterized protein.	Brg1-associated factor b; Belongs to the actin family.	0.989
L486_04559	L486_07960	A0A1B9ISM0	A0A1B9IFX9	Uncharacterized protein.	Uncharacterized protein.	0.927
L486_04789	L486_00219	A0A1B9IP59	A0A1B9IYU1	Uncharacterized protein.	ARID domain-containing protein.	0.900
L486_04789	L486_01861	A0A1B9IP59	A0A1B9J3F2	Uncharacterized protein.	SWIB domain-containing protein.	0.998
L486_04789	L486_04559	A0A1B9IP59	A0A1B9ISM0	Uncharacterized protein.	Uncharacterized protein.	0.999
L486_04789	L486_06670	A0A1B9IP59	A0A1B9IKL9	Uncharacterized protein.	Brg1-associated factor b; Belongs to the actin family.	0.991
L486_04789	L486_07960	A0A1B9IP59	A0A1B9IFX9	Uncharacterized protein.	Uncharacterized protein.	0.984
L486_06670	L486_00219	A0A1B9IKL9	A0A1B9IYU1	Brg1-associated factor b; Belongs to the actin family.	ARID domain-containing protein.	0.752