20 items (Kwoniella mangroviensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L486_05096	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (1042 aa)
	L486_06407	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	L486_06562	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (691 aa)
	L486_07427	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (443 aa)
	L486_07591	Polyubiquitin. (160 aa)
	L486_07881	Cytoplasmic protein. (1083 aa)
	L486_08437	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1683 aa)
	L486_01807	Niemann-Pick C1 protein. (1336 aa)
	L486_01543	Triacylglycerol lipase. (612 aa)
	L486_00954	Uncharacterized protein. (1294 aa)
	L486_00737	Zn(2)-C6 fungal-type domain-containing protein. (609 aa)
	L486_00485	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (285 aa)
	L486_02623	Polyubiquitin. (381 aa)
	L486_02446	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (769 aa)
	L486_02045	CIA30 domain-containing protein. (271 aa)
	L486_03824	Esterase. (796 aa)
	L486_03298	Cerevisin; Belongs to the peptidase S8 family. (517 aa)
	L486_04082	Triacylglycerol lipase. (597 aa)
	L486_05257	Abhydrolase_3 domain-containing protein. (349 aa)
	L486_04642	Uncharacterized protein. (238 aa)

Your Current Organism:

Kwoniella mangroviensis

NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L486_00485	L486_02045	A0A1B9IZ95	A0A1B9IV12	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	CIA30 domain-containing protein.	0.649
L486_00485	L486_02446	A0A1B9IZ95	A0A1B9IW73	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.881
L486_00485	L486_02623	A0A1B9IZ95	A0A1B9IWN4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Polyubiquitin.	0.639
L486_00485	L486_03298	A0A1B9IZ95	A0A1B9ITE1	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Cerevisin; Belongs to the peptidase S8 family.	0.560
L486_00485	L486_05096	A0A1B9IZ95	A0A1B9IPY9	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.953
L486_00485	L486_06407	A0A1B9IZ95	A0A1B9ILQ3	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.921
L486_00485	L486_06562	A0A1B9IZ95	A0A1B9IJF8	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.881
L486_00485	L486_07427	A0A1B9IZ95	A0A1B9IIE4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.940
L486_00485	L486_07591	A0A1B9IZ95	A0A1B9IHC7	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Polyubiquitin.	0.649
L486_00485	L486_08437	A0A1B9IZ95	A0A1B9IEE7	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.999
L486_01543	L486_04082	A0A1B9J274	A0A1B9IRK9	Triacylglycerol lipase.	Triacylglycerol lipase.	0.816
L486_01807	L486_03298	A0A1B9J2Z6	A0A1B9ITE1	Niemann-Pick C1 protein.	Cerevisin; Belongs to the peptidase S8 family.	0.499
L486_02045	L486_00485	A0A1B9IV12	A0A1B9IZ95	CIA30 domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.649
L486_02045	L486_02446	A0A1B9IV12	A0A1B9IW73	CIA30 domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.609
L486_02045	L486_02623	A0A1B9IV12	A0A1B9IWN4	CIA30 domain-containing protein.	Polyubiquitin.	0.956
L486_02045	L486_03298	A0A1B9IV12	A0A1B9ITE1	CIA30 domain-containing protein.	Cerevisin; Belongs to the peptidase S8 family.	0.466
L486_02045	L486_05096	A0A1B9IV12	A0A1B9IPY9	CIA30 domain-containing protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.669
L486_02045	L486_06407	A0A1B9IV12	A0A1B9ILQ3	CIA30 domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.632
L486_02045	L486_06562	A0A1B9IV12	A0A1B9IJF8	CIA30 domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.609
L486_02045	L486_07427	A0A1B9IV12	A0A1B9IIE4	CIA30 domain-containing protein.	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.680