STRINGSTRING
L486_06225 L486_06225 L486_08312 L486_08312 L486_08525 L486_08525 L486_08299 L486_08299 L486_08223 L486_08223 L486_08358 L486_08358 L486_08325 L486_08325 L486_07737 L486_07737 L486_07615 L486_07615 L486_07664 L486_07664 L486_07466 L486_07466 L486_07591 L486_07591 L486_07926 L486_07926 L486_07690 L486_07690 L486_06906 L486_06906 L486_06037 L486_06037 L486_06583 L486_06583 L486_06799 L486_06799 L486_06008 L486_06008 L486_06021 L486_06021 L486_06311 L486_06311 L486_05396 L486_05396 L486_06364 L486_06364 L486_05738 L486_05738 L486_05809 L486_05809 L486_05669 L486_05669 L486_05879 L486_05879 L486_05959 L486_05959 L486_04749 L486_04749 L486_04909 L486_04909 L486_04989 L486_04989 L486_05214 L486_05214 L486_05198 L486_05198 L486_05312 L486_05312 L486_03995 L486_03995 L486_04125 L486_04125 L486_04057 L486_04057 L486_04309 L486_04309 L486_04337 L486_04337 L486_04305 L486_04305 L486_04545 L486_04545 L486_03744 L486_03744 L486_03738 L486_03738 L486_02045 L486_02045 L486_02194 L486_02194 L486_02258 L486_02258 L486_02623 L486_02623 L486_02959 L486_02959 L486_00082 L486_00082 L486_00106 L486_00106 L486_00123 L486_00123 L486_00117 L486_00117 L486_00312 L486_00312 L486_00552 L486_00552 L486_00537 L486_00537 L486_00671 L486_00671 L486_00862 L486_00862 L486_00926 L486_00926 L486_01135 L486_01135 L486_01157 L486_01157 L486_01246 L486_01246 L486_01280 L486_01280 L486_01253 L486_01253 L486_01327 L486_01327 L486_01489 L486_01489 L486_01510 L486_01510 L486_01425 L486_01425 L486_01778 L486_01778
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
L486_06225DNA excision repair protein ERCC-1. (384 aa)
L486_08312Replication factor A3. (108 aa)
L486_08525COP9 signalosome complex subunit 5. (363 aa)
L486_08299Uncharacterized protein. (137 aa)
L486_08223Uncharacterized protein. (1213 aa)
L486_08358DNA-directed RNA polymerase II subunit RPB11. (161 aa)
L486_08325Zf-rbx1 domain-containing protein. (91 aa)
L486_07737DNA-directed RNA polymerase II subunit RPB4. (163 aa)
L486_07615DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1253 aa)
L486_07664Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (613 aa)
L486_07466Pre-mRNA-splicing factor ISY1. (341 aa)
L486_07591Polyubiquitin. (160 aa)
L486_07926DNA excision repair protein ERCC-3. (876 aa)
L486_07690COP9 signalosome complex subunit 2. (474 aa)
L486_06906Pre-mRNA-processing factor 19. (509 aa)
L486_06037CDK-activating kinase assembly factor MAT1. (375 aa)
L486_06583Replication factor C subunit 3/5. (356 aa)
L486_06799Chromo domain-containing protein. (765 aa)
L486_06008Uncharacterized protein. (439 aa)
L486_06021Transcription elongation factor S-II. (343 aa)
L486_06311Peptidyl-prolyl cis-trans isomerase D. (373 aa)
L486_05396Replication factor C subunit 2/4. (365 aa)
L486_06364Zds_C domain-containing protein. (1106 aa)
L486_05738Uncharacterized protein. (492 aa)
L486_05809Replication factor C subunit 3/5. (372 aa)
L486_05669RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (492 aa)
L486_05879CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (358 aa)
L486_05959Replication factor A2. (279 aa)
L486_04749DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1804 aa)
L486_04909DNA-directed RNA polymerase II subunit RPB3. (383 aa)
L486_04989Replication factor C subunit 2/4. (350 aa)
L486_05214DNA repair protein. (329 aa)
L486_05198Uncharacterized protein. (877 aa)
L486_05312UDP-galactopyranose mutase. (527 aa)
L486_03995Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1080 aa)
L486_04125TPR_REGION domain-containing protein. (512 aa)
L486_04057DNA excision repair protein ERCC-2. (806 aa)
L486_04309Uncharacterized protein. (551 aa)
L486_04337DNA excision repair protein ERCC-4. (1129 aa)
L486_04305Uncharacterized protein. (185 aa)
L486_04545DNA-directed RNA polymerase I, II, and III subunit RPABC1. (208 aa)
L486_03744DNA-directed RNA polymerase II subunit RPB7. (172 aa)
L486_03738DNA-directed RNA polymerase I, II, and III subunit RPABC4. (74 aa)
L486_02045CIA30 domain-containing protein. (271 aa)
L486_02194Replication factor C subunit 1. (1023 aa)
L486_02258PPIase cyclophilin-type domain-containing protein. (463 aa)
L486_02623Polyubiquitin. (381 aa)
L486_02959COP9 signalosome complex subunit 6. (348 aa)
L486_00082Cyclophilin. (141 aa)
L486_00106AAA domain-containing protein. (1051 aa)
L486_00123Uncharacterized protein. (584 aa)
L486_00117USP domain-containing protein; Belongs to the peptidase C19 family. (1573 aa)
L486_00312DNA excision repair protein ERCC-5. (1335 aa)
L486_00552DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
L486_00537Transcription initiation factor TFIIH subunit 1. (658 aa)
L486_00671DNA polymerase kappa subunit. (633 aa)
L486_00862PCI domain-containing protein. (287 aa)
L486_00926DNA-directed RNA polymerase I, II, and III subunit RPABC3. (163 aa)
L486_01135COP9 signalosome complex subunit 4. (467 aa)
L486_01157CULLIN_2 domain-containing protein; Belongs to the cullin family. (814 aa)
L486_01246DNA polymerase epsilon p12 subunit. (335 aa)
L486_01280Cyclin H; Belongs to the cyclin family. (439 aa)
L486_01253General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (440 aa)
L486_01327PCI domain-containing protein. (533 aa)
L486_01489CPSF_A domain-containing protein. (1299 aa)
L486_01510DNA-directed RNA polymerase I, II, and III subunit RPABC2. (153 aa)
L486_01425Pre-mRNA-splicing factor SYF1. (1026 aa)
L486_01778Uncharacterized protein. (290 aa)
Your Current Organism:
Kwoniella mangroviensis
NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435
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