STRINGSTRING
L486_07580 L486_07580 L486_07678 L486_07678 L486_07292 L486_07292 L486_07217 L486_07217 L486_07668 L486_07668 L486_07573 L486_07573 L486_07579 L486_07579 L486_07502 L486_07502 L486_07168 L486_07168 L486_07158 L486_07158 L486_07684 L486_07684 L486_07875 L486_07875 L486_07615 L486_07615 L486_07585 L486_07585 L486_07575 L486_07575 L486_07574 L486_07574 L486_07836 L486_07836 L486_07826 L486_07826 L486_07817 L486_07817 L486_08043 L486_08043 L486_07823 L486_07823 L486_07737 L486_07737 L486_07979 L486_07979 L486_08000 L486_08000 L486_08003 L486_08003 L486_07993 L486_07993 L486_08335 L486_08335 L486_07986 L486_07986 L486_08358 L486_08358 L486_08311 L486_08311 L486_08499 L486_08499 L486_08309 L486_08309 L486_08553 L486_08553 L486_08445 L486_08445 L486_08459 L486_08459 L486_08412 L486_08412 L486_08548 L486_08548 L486_03150 L486_03150 L486_02026 L486_02026 L486_01872 L486_01872 L486_01894 L486_01894 L486_01857 L486_01857 L486_01832 L486_01832 L486_01778 L486_01778 L486_01744 L486_01744 L486_01537 L486_01537 L486_01633 L486_01633 L486_01612 L486_01612 L486_01575 L486_01575 L486_01580 L486_01580 L486_01415 L486_01415 L486_01510 L486_01510 L486_01456 L486_01456 L486_01406 L486_01406 L486_01380 L486_01380 L486_01355 L486_01355 L486_01320 L486_01320 L486_01274 L486_01274 L486_01283 L486_01283 L486_01223 L486_01223 L486_01072 L486_01072 L486_01129 L486_01129 L486_01075 L486_01075 L486_00911 L486_00911 L486_00980 L486_00980 L486_00950 L486_00950 L486_00924 L486_00924 L486_00926 L486_00926 L486_00907 L486_00907 L486_00894 L486_00894 L486_00858 L486_00858 L486_00835 L486_00835 L486_00836 L486_00836 L486_00813 L486_00813 L486_00820 L486_00820 L486_00757 L486_00757 L486_00761 L486_00761 L486_00638 L486_00638 L486_00613 L486_00613 L486_00562 L486_00562 L486_00552 L486_00552 L486_00530 L486_00530 L486_00495 L486_00495 L486_00467 L486_00467 L486_00413 L486_00413 L486_00147 L486_00147 L486_00274 L486_00274 L486_00265 L486_00265 L486_00077 L486_00077 L486_00067 L486_00067 L486_00159 L486_00159 L486_00103 L486_00103 L486_00118 L486_00118 L486_00111 L486_00111 L486_00082 L486_00082 L486_00060 L486_00060 L486_03010 L486_03010 L486_02997 L486_02997 L486_02992 L486_02992 L486_02968 L486_02968 L486_02922 L486_02922 L486_02830 L486_02830 L486_02773 L486_02773 L486_02753 L486_02753 L486_02731 L486_02731 L486_02718 L486_02718 L486_02688 L486_02688 L486_02671 L486_02671 L486_02467 L486_02467 L486_02545 L486_02545 L486_02494 L486_02494 L486_02450 L486_02450 L486_02432 L486_02432 L486_02262 L486_02262 L486_02069 L486_02069 L486_02154 L486_02154 L486_02108 L486_02108 L486_02070 L486_02070 L486_02084 L486_02084 L486_02050 L486_02050 L486_03828 L486_03828 L486_03771 L486_03771 L486_03738 L486_03738 L486_03712 L486_03712 L486_03744 L486_03744 L486_03625 L486_03625 L486_03633 L486_03633 L486_03525 L486_03525 L486_03549 L486_03549 L486_03464 L486_03464 L486_03367 L486_03367 L486_03254 L486_03254 L486_03342 L486_03342 L486_03265 L486_03265 L486_03199 L486_03199 L486_03158 L486_03158 L486_03126 L486_03126 L486_03059 L486_03059 L486_03055 L486_03055 L486_04545 L486_04545 L486_04529 L486_04529 L486_04516 L486_04516 L486_04462 L486_04462 L486_04442 L486_04442 L486_04359 L486_04359 L486_04247 L486_04247 L486_04201 L486_04201 LSM8 LSM8 L486_04098 L486_04098 L486_04044 L486_04044 L486_04059 L486_04059 L486_04003 L486_04003 L486_03904 L486_03904 L486_05290 L486_05290 L486_05119 L486_05119 L486_05092 L486_05092 L486_04958 L486_04958 L486_05125 L486_05125 L486_04959 L486_04959 L486_04975 L486_04975 L486_04939 L486_04939 L486_04909 L486_04909 CLP1 CLP1 L486_04884 L486_04884 L486_04599 L486_04599 L486_04749 L486_04749 L486_04714 L486_04714 L486_05837 L486_05837 L486_05916 L486_05916 L486_05725 L486_05725 L486_05832 L486_05832 L486_05798 L486_05798 L486_05528 L486_05528 L486_05681 L486_05681 L486_05650 L486_05650 L486_05571 L486_05571 L486_05521 L486_05521 L486_05573 L486_05573 L486_05527 L486_05527 L486_05536 L486_05536 L486_05449 L486_05449 L486_05422 L486_05422 L486_05405 L486_05405 L486_06379 L486_06379 L486_06265 L486_06265 L486_06248 L486_06248 L486_06329 L486_06329 L486_06264 L486_06264 L486_06268 L486_06268 L486_06163 L486_06163 L486_06798 L486_06798 L486_06136 L486_06136 L486_06034 L486_06034 L486_06036 L486_06036 L486_06690 L486_06690 L486_06752 L486_06752 L486_06030 L486_06030 L486_06525 L486_06525 L486_06668 L486_06668 L486_06549 L486_06549 L486_07095 L486_07095 L486_06614 L486_06614 L486_06520 L486_06520 L486_06913 L486_06913 L486_06907 L486_06907 L486_07113 L486_07113 L486_06823 L486_06823 L486_06868 L486_06868 L486_07380 L486_07380 L486_07280 L486_07280 L486_07431 L486_07431 L486_07248 L486_07248 L486_07401 L486_07401 L486_07610 L486_07610 L486_07341 L486_07341
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
L486_07580Branchpoint-bridging protein. (541 aa)
L486_07678Pre-mRNA-splicing factor CWC25. (448 aa)
L486_07292Nuclear pore complex protein Nup98-Nup96. (1945 aa)
L486_07217PWI domain-containing protein. (389 aa)
L486_07668U5 small nuclear ribonucleoprotein component. (993 aa)
L486_07573Small nuclear ribonucleoprotein F. (84 aa)
L486_07579Pre-mRNA-splicing factor SLU7. (581 aa)
L486_07502Splicing factor 3A subunit 2. (219 aa)
L486_07168Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (128 aa)
L486_07158RRM domain-containing protein. (342 aa)
L486_07684Nuclear pore complex protein Nup160. (1468 aa)
L486_07875Uncharacterized protein. (1547 aa)
L486_07615DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1253 aa)
L486_07585Cytoplasmic protein. (378 aa)
L486_07575Pre-mRNA-splicing factor 38A. (286 aa)
L486_07574Nsp1_C domain-containing protein. (833 aa)
L486_07836Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. (732 aa)
L486_07826Uncharacterized protein. (546 aa)
L486_07817Pre-mRNA-splicing factor CLF1. (724 aa)
L486_08043Uncharacterized protein. (174 aa)
L486_07823G-patch_2 domain-containing protein. (470 aa)
L486_07737DNA-directed RNA polymerase II subunit RPB4. (163 aa)
L486_07979G-patch domain-containing protein. (1020 aa)
L486_08000Pre-mRNA-splicing factor SPF27. (218 aa)
L486_08003PHD finger-like domain-containing protein 5B. (107 aa)
L486_07993HIV Tat-specific factor 1. (407 aa)
L486_08335Suf domain-containing protein. (1097 aa)
L486_07986U2-associated protein SR140. (777 aa)
L486_08358DNA-directed RNA polymerase II subunit RPB11. (161 aa)
L486_08311Small nuclear ribonucleoprotein Sm D2. (111 aa)
L486_08499Fungal_trans domain-containing protein. (669 aa)
L486_08309Fungal_trans domain-containing protein. (663 aa)
L486_08553Peptidyl-prolyl isomerase CWC27. (455 aa)
L486_08445Small nuclear ribonucleoprotein G. (62 aa)
L486_08459RanBD1 domain-containing protein. (514 aa)
L486_08412Ran-binding protein 1. (271 aa)
L486_08548GH16 domain-containing protein. (394 aa)
L486_03150Uncharacterized protein. (630 aa)
L486_02026Uncharacterized protein. (626 aa)
L486_01872Pre-mRNA-splicing factor PRP46. (451 aa)
L486_01894Protein FAM50. (341 aa)
L486_01857Glycine-rich RNA binding protein. (177 aa)
L486_01832Uncharacterized protein. (242 aa)
L486_01778Uncharacterized protein. (290 aa)
L486_01744Pre-mRNA branch site protein p14. (120 aa)
L486_01537Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1324 aa)
L486_01633Uncharacterized protein. (722 aa)
L486_01612Nkap_C domain-containing protein. (504 aa)
L486_01575Uncharacterized protein. (163 aa)
L486_01580Uncharacterized protein. (816 aa)
L486_01415GC-rich sequence DNA-binding factor. (821 aa)
L486_01510DNA-directed RNA polymerase I, II, and III subunit RPABC2. (153 aa)
L486_01456G patch domain-containing protein 1. (876 aa)
L486_01406Pre-mRNA-splicing factor CWC22. (827 aa)
L486_01380Transcription factor. (558 aa)
L486_01355Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
L486_01320Fip1 domain-containing protein. (714 aa)
L486_01274Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
L486_01283Splicing factor U2AF 35 kDa subunit. (247 aa)
L486_01223RRM domain-containing protein. (274 aa)
L486_01072Splicing factor 3B subunit 1. (1140 aa)
L486_01129Uncharacterized protein. (374 aa)
L486_01075RRM domain-containing protein. (286 aa)
L486_00911Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (801 aa)
L486_00980SAE2 domain-containing protein. (895 aa)
L486_00950Uncharacterized protein. (914 aa)
L486_00924Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
L486_00926DNA-directed RNA polymerase I, II, and III subunit RPABC3. (163 aa)
L486_00907Smad nuclear-interacting protein 1. (254 aa)
L486_00894SAP domain-containing protein. (257 aa)
L486_00858RNA-binding domain-containing protein, X-linked 2. (361 aa)
L486_00835Splicing factor 3B subunit 2. (610 aa)
L486_00836Uncharacterized protein. (650 aa)
L486_00813Uncharacterized protein. (51 aa)
L486_00820U4/U6.U5 tri-snRNP-associated protein 1. (678 aa)
L486_00757Uncharacterized protein. (731 aa)
L486_00761Pre-mRNA-splicing factor CWC24. (320 aa)
L486_00638Ubiquitin-like protein 5. (274 aa)
L486_00613Small nuclear ribonucleoprotein. (353 aa)
L486_00562Uncharacterized protein; Belongs to the MT-A70-like family. (534 aa)
L486_00552DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
L486_00530Splicing factor 3B subunit 4. (320 aa)
L486_00495zf-U1 domain-containing protein. (212 aa)
L486_00467Uncharacterized protein. (354 aa)
L486_00413Nuclear cap-binding protein subunit 2. (225 aa)
L486_00147RRM_1 domain-containing protein. (652 aa)
L486_00274Uncharacterized protein. (443 aa)
L486_00265CID domain-containing protein. (735 aa)
L486_00077Pre-mRNA-processing factor 6. (940 aa)
L486_00067U1 small nuclear ribonucleoprotein 70kDa. (430 aa)
L486_00159Transformer-2 protein. (270 aa)
L486_00103Transcription elongation regulator 1. (814 aa)
L486_00118RanBD1 domain-containing protein. (778 aa)
L486_00111Cactin. (736 aa)
L486_00082Cyclophilin. (141 aa)
L486_00060Pre-mRNA-processing-splicing factor 8. (2374 aa)
L486_03010RED_N domain-containing protein. (614 aa)
L486_02997Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43. (785 aa)
L486_02992Sde2_N_Ubi domain-containing protein. (265 aa)
L486_02968Uncharacterized protein. (1444 aa)
L486_02922Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (679 aa)
L486_02830Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (479 aa)
L486_02773Pre-mRNA-splicing factor RSE1. (1216 aa)
L486_02753Uncharacterized protein. (470 aa)
L486_02731Uncharacterized protein. (457 aa)
L486_02718WD repeat-containing protein. (392 aa)
L486_02688C3H1-type domain-containing protein. (635 aa)
L486_02671C2H2-type domain-containing protein. (845 aa)
L486_02467Bud site selection protein 31. (148 aa)
L486_02545Beta-catenin-like protein 1. (629 aa)
L486_02494Nuclear pore complex protein Nup205. (1926 aa)
L486_02450DUF262 domain-containing protein. (541 aa)
L486_02432DUF2040 domain-containing protein. (463 aa)
L486_02262Uncharacterized protein. (667 aa)
L486_02069Uncharacterized protein. (1221 aa)
L486_02154Pre-mRNA-splicing factor CEF1. (856 aa)
L486_02108Cell cycle control protein cwf19. (890 aa)
L486_02070C2H2-type domain-containing protein. (261 aa)
L486_02084Pre-mRNA-splicing factor SYF2. (337 aa)
L486_02050CMGC/DYRK/PRP4 protein kinase. (850 aa)
L486_03828Pre-mRNA-splicing helicase BRR2. (2164 aa)
L486_03771Uncharacterized protein. (2072 aa)
L486_03738DNA-directed RNA polymerase I, II, and III subunit RPABC4. (74 aa)
L486_03712Uncharacterized protein. (634 aa)
L486_03744DNA-directed RNA polymerase II subunit RPB7. (172 aa)
L486_03625RRM domain-containing protein. (176 aa)
L486_03633U4/U6 small nuclear ribonucleoprotein PRP4. (538 aa)
L486_03525Protein mago nashi. (154 aa)
L486_03549Nuclear pore complex protein Nup155. (1331 aa)
L486_03464WD_REPEATS_REGION domain-containing protein. (472 aa)
L486_03367Poly(RC)-binding protein 2/3/4. (394 aa)
L486_03254Uncharacterized protein. (301 aa)
L486_03342Peptidyl-prolyl cis-trans isomerase-like 2. (586 aa)
L486_03265Nup54 domain-containing protein. (578 aa)
L486_03199Microfibrillar-associated protein 1. (526 aa)
L486_03158Uncharacterized protein. (614 aa)
L486_03126Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (179 aa)
L486_03059Small nuclear ribonucleoprotein B and B. (209 aa)
L486_03055mRNA binding protein. (269 aa)
L486_04545DNA-directed RNA polymerase I, II, and III subunit RPABC1. (208 aa)
L486_04529Pre-mRNA-splicing factor SLT11. (316 aa)
L486_04516Coiled-coil domain-containing protein 12. (169 aa)
L486_04462Uncharacterized protein. (582 aa)
L486_04442ATP-dependent RNA helicase prh1. (814 aa)
L486_04359Uncharacterized protein. (858 aa)
L486_04247ATP-dependent RNA helicase DHX8/PRP22. (1174 aa)
L486_04201Endo-1,3(4)-beta-glucanase. (376 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (79 aa)
L486_04098Uncharacterized protein. (1009 aa)
L486_04044U4/U6.U5 tri-snRNP-associated protein 2. (576 aa)
L486_04059U4/U6 small nuclear ribonucleoprotein PRP3. (609 aa)
L486_04003Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (176 aa)
L486_03904Splicing factor 3A subunit 3. (521 aa)
L486_05290Prp8 binding protein. (353 aa)
L486_05119Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (213 aa)
L486_05092ATP-dependent RNA helicase DDX41. (621 aa)
L486_04958FoP_duplication domain-containing protein. (69 aa)
L486_05125SAP domain-containing protein. (583 aa)
L486_04959THO complex subunit 4. (120 aa)
L486_04975Pre-mRNA-processing factor 17. (615 aa)
L486_04939Uncharacterized protein. (348 aa)
L486_04909DNA-directed RNA polymerase II subunit RPB3. (383 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (501 aa)
L486_04884mRNA methyltransferase; Belongs to the MT-A70-like family. (402 aa)
L486_04599Splicing factor 3A subunit 1. (772 aa)
L486_04749DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1804 aa)
L486_04714Pinin_SDK_memA domain-containing protein. (319 aa)
L486_05837Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
L486_05916Uncharacterized protein. (577 aa)
L486_05725Uncharacterized protein. (1103 aa)
L486_05832Uncharacterized protein. (1467 aa)
L486_05798RNA binding protein. (284 aa)
L486_05528Chaperone regulator. (215 aa)
L486_05681Matrin-type domain-containing protein. (357 aa)
L486_05650Protein CWC15. (274 aa)
L486_05571Uncharacterized protein. (779 aa)
L486_05521Uncharacterized protein. (260 aa)
L486_05573NTF2 domain-containing protein. (185 aa)
L486_05527Uncharacterized protein. (762 aa)
L486_05536RNA-binding protein with serine-rich domain 1. (330 aa)
L486_05449RNA-binding protein 8A. (132 aa)
L486_05422Nuclear mRNA splicing protein. (337 aa)
L486_05405Pre-mRNA-processing protein 45. (579 aa)
L486_06379Uncharacterized protein. (353 aa)
L486_06265Nuclear pore complex protein Nup188. (1888 aa)
L486_06248Uncharacterized protein. (95 aa)
L486_06329Pre-mRNA-splicing factor 18. (395 aa)
L486_06264ABM domain-containing protein. (114 aa)
L486_06268U2 small nuclear ribonucleoprotein A. (259 aa)
L486_06163mRNA export factor. (360 aa)
L486_06798Pre-mRNA-splicing factor CWC21. (382 aa)
L486_06136Tudor domain-containing protein. (244 aa)
L486_06034Protein FAM32A. (131 aa)
L486_06036Splicing factor U2AF 65 kDa subunit. (642 aa)
L486_06690Uncharacterized protein. (369 aa)
L486_06752U4/U6 small nuclear ribonucleoprotein PRP31. (570 aa)
L486_06030Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (654 aa)
L486_06525Pre-mRNA-splicing factor CWC26. (327 aa)
L486_06668Small nuclear ribonucleoprotein Sm D3. (124 aa)
L486_06549Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (856 aa)
L486_07095Pumilio-family RNA binding protein. (945 aa)
L486_06614Polyadenylate-binding protein 2. (197 aa)
L486_06520Uncharacterized protein. (307 aa)
L486_06913Splicing factor 3B subunit 5. (134 aa)
L486_06907Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1073 aa)
L486_07113Nuclear pore protein. (949 aa)
L486_06823Uncharacterized protein. (424 aa)
L486_06868Uncharacterized protein. (404 aa)
L486_07380ATP-dependent RNA helicase DDX35. (701 aa)
L486_07280Nuclear cap-binding protein subunit 1. (934 aa)
L486_07431Pre-mRNA-processing ATP-dependent RNA helicase PRP5. (1140 aa)
L486_07248Uncharacterized protein; Belongs to the WD repeat SEC13 family. (361 aa)
L486_07401Peptidylprolyl isomerase domain and WD-repeat protein 1. (656 aa)
L486_07610PH domain-containing protein. (1141 aa)
L486_07341RRM domain-containing protein. (266 aa)
Your Current Organism:
Kwoniella mangroviensis
NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435
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