56 items (Kwoniella mangroviensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L486_01253	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (440 aa)
	L486_08312	Replication factor A3. (108 aa)
	L486_08299	Uncharacterized protein. (137 aa)
	L486_08213	CBFD_NFYB_HMF domain-containing protein. (212 aa)
	L486_08325	Zf-rbx1 domain-containing protein. (91 aa)
	L486_07898	TFIIH basal transcription factor complex TTD-A subunit. (81 aa)
	L486_07664	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (613 aa)
	L486_07926	DNA excision repair protein ERCC-3. (876 aa)
	L486_07273	DNA polymerase delta subunit 2. (506 aa)
	L486_06037	CDK-activating kinase assembly factor MAT1. (375 aa)
	L486_06583	Replication factor C subunit 3/5. (356 aa)
	L486_06799	Chromo domain-containing protein. (765 aa)
	L486_06688	Chromosome transmission fidelity protein 1. (891 aa)
	L486_06008	Uncharacterized protein. (439 aa)
	L486_06199	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (330 aa)
	L486_06211	Uncharacterized protein. (1474 aa)
	L486_06225	DNA excision repair protein ERCC-1. (384 aa)
	L486_05396	Replication factor C subunit 2/4. (365 aa)
	L486_05422	Nuclear mRNA splicing protein. (337 aa)
	L486_06364	Zds_C domain-containing protein. (1106 aa)
	L486_05702	Uncharacterized protein. (1072 aa)
	L486_05738	Uncharacterized protein. (492 aa)
	L486_05809	Replication factor C subunit 3/5. (372 aa)
	L486_05669	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (492 aa)
	L486_05879	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (358 aa)
	L486_05959	Replication factor A2. (279 aa)
	L486_04989	Replication factor C subunit 2/4. (350 aa)
	L486_05214	DNA repair protein. (329 aa)
	L486_05312	UDP-galactopyranose mutase. (527 aa)
	L486_03912	DNA helicase II/ATP-dependent DNA helicase PcrA. (1078 aa)
	L486_04050	DNA ligase 1. (1005 aa)
	L486_04125	TPR_REGION domain-containing protein. (512 aa)
	L486_04057	DNA excision repair protein ERCC-2. (806 aa)
	L486_04337	DNA excision repair protein ERCC-4. (1129 aa)
	L486_04305	Uncharacterized protein. (185 aa)
	L486_04593	UV excision repair protein Rad23. (401 aa)
	L486_02199	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2244 aa)
	L486_02194	Replication factor C subunit 1. (1023 aa)
	L486_02349	DNA polymerase. (1058 aa)
	L486_02734	Uncharacterized protein. (891 aa)
	L486_02978	DNA polymerase epsilon subunit B. (626 aa)
	L486_00106	AAA domain-containing protein. (1051 aa)
	L486_00123	Uncharacterized protein. (584 aa)
	L486_00312	DNA excision repair protein ERCC-5. (1335 aa)
	L486_00537	Transcription initiation factor TFIIH subunit 1. (658 aa)
	L486_00661	Uncharacterized protein. (234 aa)
	L486_00785	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (574 aa)
	L486_00951	DNA ligase. (817 aa)
	L486_01157	CULLIN_2 domain-containing protein; Belongs to the cullin family. (814 aa)
	L486_01182	CMGC/CDK protein kinase. (456 aa)
	L486_01246	DNA polymerase epsilon p12 subunit. (335 aa)
	L486_01280	Cyclin H; Belongs to the cyclin family. (439 aa)
	L486_01339	DNA_LIGASE_A3 domain-containing protein. (632 aa)
	L486_01355	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
	L486_01489	CPSF_A domain-containing protein. (1299 aa)
	L486_01832	Uncharacterized protein. (242 aa)

Your Current Organism:

Kwoniella mangroviensis

NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L486_00106	L486_00312	A0A1B9IY67	A0A1B9IYR7	AAA domain-containing protein.	DNA excision repair protein ERCC-5.	0.769
L486_00106	L486_00537	A0A1B9IY67	A0A1B9IZF1	AAA domain-containing protein.	Transcription initiation factor TFIIH subunit 1.	0.607
L486_00106	L486_00785	A0A1B9IY67	A0A1B9J030	AAA domain-containing protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.465
L486_00106	L486_00951	A0A1B9IY67	A0A1B9J0W8	AAA domain-containing protein.	DNA ligase.	0.785
L486_00106	L486_01157	A0A1B9IY67	A0A1B9J151	AAA domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.632
L486_00106	L486_02194	A0A1B9IY67	A0A1B9IVH8	AAA domain-containing protein.	Replication factor C subunit 1.	0.584
L486_00106	L486_02199	A0A1B9IY67	A0A1B9IVH1	AAA domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.861
L486_00106	L486_02349	A0A1B9IY67	A0A1B9IVX3	AAA domain-containing protein.	DNA polymerase.	0.819
L486_00106	L486_02978	A0A1B9IY67	A0A1B9IXQ1	AAA domain-containing protein.	DNA polymerase epsilon subunit B.	0.810
L486_00106	L486_03912	A0A1B9IY67	A0A1B9IQT8	AAA domain-containing protein.	DNA helicase II/ATP-dependent DNA helicase PcrA.	0.848
L486_00106	L486_04050	A0A1B9IY67	A0A1B9IR55	AAA domain-containing protein.	DNA ligase 1.	0.785
L486_00106	L486_04057	A0A1B9IY67	A0A1B9IRH1	AAA domain-containing protein.	DNA excision repair protein ERCC-2.	0.746
L486_00106	L486_04305	A0A1B9IY67	A0A1B9IS73	AAA domain-containing protein.	Uncharacterized protein.	0.552
L486_00106	L486_04337	A0A1B9IY67	A0A1B9IRY6	AAA domain-containing protein.	DNA excision repair protein ERCC-4.	0.758
L486_00106	L486_04593	A0A1B9IY67	A0A1B9IST4	AAA domain-containing protein.	UV excision repair protein Rad23.	0.579
L486_00106	L486_04989	A0A1B9IY67	A0A1B9IPW5	AAA domain-containing protein.	Replication factor C subunit 2/4.	0.982
L486_00106	L486_05214	A0A1B9IY67	A0A1B9IQA6	AAA domain-containing protein.	DNA repair protein.	0.582
L486_00106	L486_05396	A0A1B9IY67	A0A1B9ILR1	AAA domain-containing protein.	Replication factor C subunit 2/4.	0.986
L486_00106	L486_05809	A0A1B9IY67	A0A1B9IN16	AAA domain-containing protein.	Replication factor C subunit 3/5.	0.982
L486_00106	L486_05959	A0A1B9IY67	A0A1B9INZ1	AAA domain-containing protein.	Replication factor A2.	0.774