STRINGSTRING
ALR19309.1 ALR19309.1 ALR20659.1 ALR20659.1 ALR21105.1 ALR21105.1 ALR21499.1 ALR21499.1 ALR22690.1 ALR22690.1 carB carB ALR22186.1 ALR22186.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALR19309.1Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1198 aa)
ALR20659.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1013 aa)
ALR21105.1acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa)
ALR21499.1Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (491 aa)
ALR22690.1methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
carBCarbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family. (1111 aa)
ALR22186.1acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (450 aa)
Your Current Organism:
Sphingobium baderi
NCBI taxonomy Id: 1332080
Other names: CCM 7981, DSM 25433, S. baderi, Sphingobium baderi Kaur et al. 2013, strain LL03
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