STRINGSTRING
BW730_00560 BW730_00560 AQP46417.1 AQP46417.1 AQP46517.1 AQP46517.1 AQP46536.1 AQP46536.1 mutM mutM polA polA AQP49339.1 AQP49339.1 AQP47988.1 AQP47988.1 AQP48193.1 AQP48193.1 BW730_15390 BW730_15390 AQP48767.1 AQP48767.1 AQP48809.1 AQP48809.1 nth nth
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BW730_00560Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (187 aa)
AQP46417.1Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
AQP46517.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
AQP46536.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
mutMRibonuclease III; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (279 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (906 aa)
AQP49339.1ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent DNA ligase family. (505 aa)
AQP47988.1DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
AQP48193.1Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
BW730_15390Na+/H+ antiporter subunit A; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
AQP48767.1Endonuclease VIII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (287 aa)
AQP48809.1DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (223 aa)
Your Current Organism:
Tessaracoccus aquimaris
NCBI taxonomy Id: 1332264
Other names: JCM 19289, KACC 17540, T. aquimaris, Tessaracoccus aquimaris Tak et al. 2018, Tessaracoccus sp. NSG39, strain NSG39
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