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rpl7ae rpl7ae rps28e rps28e AGN00224.1 AGN00224.1 rpl21e rpl21e rpl37ae rpl37ae rps19e rps19e rpl15e rpl15e rpl40e rpl40e rpl44e rpl44e rps2P rps2P rps9p rps9p rpl13p rpl13p rpl18e rpl18e rps13p rps13p rpl31e rpl31e rps7 rps7 rps12P rps12P rps17E rps17E rps19p rps19p rps3p rps3p rps17p rps17p rps4e rps4e rps14P rps14P rps8p rps8p rpl32e rpl32e rpl19e rpl19e rps5p rps5p rpl12p rpl12p rpl1P rpl1P rps6e rps6e rps3ae rps3ae rps15p rps15p rps24e rps24e
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl7ae50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (120 aa)
rps28eCOG2053 Ribosomal protein S28E/S33; Belongs to the eukaryotic ribosomal protein eS28 family. (74 aa)
AGN00224.1COG2075 Ribosomal protein L24E. (100 aa)
rpl21eCOG2139 Ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. (96 aa)
rpl37ae50S ribosomal protein L37Ae; Binds to the 23S rRNA. (94 aa)
rps19e30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (151 aa)
rpl15eCOG1632 Ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family. (196 aa)
rpl40eCOG1552 Ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family. (49 aa)
rpl44e50S ribosomal protein L44e; Binds to the 23S rRNA. (93 aa)
rps2PCOG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (258 aa)
rps9pCOG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (131 aa)
rpl13p50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (145 aa)
rpl18eCOG1727 Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family. (116 aa)
rps13p30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (178 aa)
rpl31eCOG2097 Ribosomal protein L31E; Belongs to the ribosomal protein L31e family. (92 aa)
rps730S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (190 aa)
rps12P30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (142 aa)
rps17ECOG1383 Ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family. (62 aa)
rps19p30S ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (141 aa)
rps3p30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (329 aa)
rps17p30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (115 aa)
rps4eCOG1471 Ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family. (266 aa)
rps14P30S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. (61 aa)
rps8p30S ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa)
rpl32e50S ribosomal protein L32e; COG0468 RecA/RadA recombinase; Belongs to the eukaryotic ribosomal protein eL32 family. (326 aa)
rpl19e50S ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (155 aa)
rps5p30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. (216 aa)
rpl12p50S ribosomal protein L12P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rpl1P50S ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (212 aa)
rps6eCOG2125 Ribosomal protein S6E (S10); Belongs to the eukaryotic ribosomal protein eS6 family. (129 aa)
rps3aeCOG1890 Ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family. (211 aa)
rps15pCOG0184 Ribosomal protein S15P/S13E. (154 aa)
rps24eCOG2004 Ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family. (104 aa)
Your Current Organism:
Salinarchaeum sp. HarchtBsk1
NCBI taxonomy Id: 1333523
Other names: S. sp. Harcht-Bsk1, Salinarchaeum sp. Harcht-Bsk1
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