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AKL17_2848 AKL17_2848 AKL17_0100 AKL17_0100 AKL17_0875 AKL17_0875 trpF trpF tpiA tpiA pgi pgi rpiA rpiA AKL17_2849 AKL17_2849 xylA xylA AKL17_3151 AKL17_3151 kduI kduI uxaC uxaC rhaA rhaA idi idi
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
AKL17_28481--5-[methylideneamino] imidazole-4-carboxamide isomerase; Belongs to the HisA/HisF family. (147 aa)
AKL17_01002-hydroxychromene-2-carboxylate isomerase. (205 aa)
AKL17_08753-hydroxydecanoyl- dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (170 aa)
trpFN-anthranilate isomerase; Belongs to the TrpF family. (211 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (248 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (536 aa)
rpiARibose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (262 aa)
AKL17_28491--5-[methylideneamino] imidazole-4-carboxamide isomerase; Belongs to the HisA/HisF family. (94 aa)
xylAXylose isomerase; Belongs to the xylose isomerase family. (434 aa)
AKL17_3151Hydroxypyruvate isomerase; Belongs to the hyi family. (253 aa)
kduI5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (274 aa)
uxaCGlucuronate isomerase. (468 aa)
rhaAL-rhamnose isomerase; Belongs to the rhamnose isomerase family. (414 aa)
idiIsopentenyl-diphosphate delta-isomerase, type 1; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). (177 aa)
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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