STRINGSTRING
trmFO trmFO AKL17_1758 AKL17_1758 rsmA rsmA prmC prmC AKL17_1676 AKL17_1676 AKL17_1663 AKL17_1663 AKL17_1421 AKL17_1421 AKL17_1420 AKL17_1420 AKL17_4763 AKL17_4763 AKL17_4606 AKL17_4606 AKL17_0018 AKL17_0018 AKL17_0061 AKL17_0061 AKL17_0054 AKL17_0054 ubiG ubiG AKL17_0062 AKL17_0062 AKL17_0063 AKL17_0063 rlmH rlmH AKL17_0156 AKL17_0156 AKL17_0157 AKL17_0157 AKL17_0182 AKL17_0182 AKL17_0203 AKL17_0203 AKL17_0241 AKL17_0241 AKL17_0318 AKL17_0318 prmA prmA AKL17_0346 AKL17_0346 AKL17_0369 AKL17_0369 AKL17_0517 AKL17_0517 trmD trmD AKL17_0538 AKL17_0538 rsmI rsmI AKL17_0755 AKL17_0755 ubiE ubiE trmB trmB AKL17_0931 AKL17_0931 AKL17_0970 AKL17_0970 rlmJ rlmJ AKL17_0055 AKL17_0055 AKL17_0057 AKL17_0057 AKL17_0059 AKL17_0059 AKL17_1221 AKL17_1221 thyX thyX AKL17_1279 AKL17_1279 AKL17_1293 AKL17_1293 AKL17_1297 AKL17_1297 AKL17_1320 AKL17_1320 AKL17_1321 AKL17_1321 AKL17_4575 AKL17_4575 AKL17_4566 AKL17_4566 rsmG rsmG AKL17_4222 AKL17_4222 AKL17_4192 AKL17_4192 AKL17_4191 AKL17_4191 AKL17_4087 AKL17_4087 AKL17_4027 AKL17_4027 AKL17_3979 AKL17_3979 AKL17_3927 AKL17_3927 AKL17_3736 AKL17_3736 AKL17_3680 AKL17_3680 AKL17_3677 AKL17_3677 AKL17_3578 AKL17_3578 AKL17_3551 AKL17_3551 AKL17_3463 AKL17_3463 AKL17_3457 AKL17_3457 AKL17_3359 AKL17_3359 AKL17_3329 AKL17_3329 AKL17_3018 AKL17_3018 AKL17_2986 AKL17_2986 AKL17_2853 AKL17_2853 rsmH rsmH AKL17_2825 AKL17_2825 AKL17_2787 AKL17_2787 AKL17_2768 AKL17_2768 rpsF rpsF AKL17_2618 AKL17_2618 AKL17_2616 AKL17_2616 AKL17_2587 AKL17_2587 rlmE rlmE AKL17_2486 AKL17_2486 AKL17_2436 AKL17_2436 AKL17_2377 AKL17_2377 pcm pcm trmJ trmJ AKL17_2023 AKL17_2023 AKL17_2012 AKL17_2012
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trmFOtRNA -methyltransferase Gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (435 aa)
AKL17_1758uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (259 aa)
rsmADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (280 aa)
prmCHemK family modification methylase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (270 aa)
AKL17_1676Modification methylase MjaV; Belongs to the N(4)/N(6)-methyltransferase family. (182 aa)
AKL17_1663Methyltransferase type 11. (226 aa)
AKL17_1421Putative trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. (451 aa)
AKL17_1420Putative trimethylamine methyltransferase protein. (62 aa)
AKL17_476316S rRNA mG 1207 methyltransferase. (233 aa)
AKL17_4606DNA methylase N-4/N-6 domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family. (374 aa)
AKL17_0018Homocysteine S-methyltransferase protein. (293 aa)
AKL17_0061Precorrin-3 methyltransferase. (68 aa)
AKL17_0054Precorrin 6A synthase. (188 aa)
ubiG3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (249 aa)
AKL17_0062Precorrin-3 methyltransferase. (47 aa)
AKL17_0063Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. (243 aa)
rlmHrRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (154 aa)
AKL17_0156Hypothetical protein. (71 aa)
AKL17_0157Methyltransferase small. (262 aa)
AKL17_0182Kinase. (199 aa)
AKL17_0203Hypothetical protein. (288 aa)
AKL17_0241Glycine cleavage system T protein; Belongs to the GcvT family. (793 aa)
AKL17_0318methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (149 aa)
prmARibosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (291 aa)
AKL17_0346Hypothetical protein. (234 aa)
AKL17_0369Hypothetical protein. (206 aa)
AKL17_0517N-6 DNA methylase. (503 aa)
trmDtRNA -methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (277 aa)
AKL17_0538methylated-DNA--[protein]-cysteine S-methyltransferase Ada. (156 aa)
rsmIFis family transcriptional regulator; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (335 aa)
AKL17_0755Siroheme synthase; Belongs to the precorrin methyltransferase family. (267 aa)
ubiE2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (250 aa)
trmBtRNA -methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (240 aa)
AKL17_0931Hypothetical protein. (273 aa)
AKL17_0970Hypothetical protein. (359 aa)
rlmJHypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. (261 aa)
AKL17_0055uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (248 aa)
AKL17_0057Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. (259 aa)
AKL17_0059Putative precorrin-6y C5,15-methyltransferase. (347 aa)
AKL17_1221Hypothetical protein. (77 aa)
thyXFAD-dependent thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (301 aa)
AKL17_1279Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (286 aa)
AKL17_1293Hypothetical protein. (353 aa)
AKL17_1297Hypothetical protein. (650 aa)
AKL17_1320DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada. (189 aa)
AKL17_1321methylated-DNA--protein-cysteine methyltransferase. (205 aa)
AKL17_4575Hypothetical protein. (276 aa)
AKL17_456623S rRNA -methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (406 aa)
rsmGGlucose-inhibited division protein B; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (203 aa)
AKL17_422216S ribosomal RNA methyltransferase RsmE. (188 aa)
AKL17_4192Ribosomal RNA small subunit methyltransferase B. (173 aa)
AKL17_4191Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (267 aa)
AKL17_4087Hypothetical protein. (200 aa)
AKL17_4027DNA methylase N-4/N-6 domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family. (247 aa)
AKL17_3979Hypothetical protein. (136 aa)
AKL17_3927Modification methylase MjaV; Belongs to the N(4)/N(6)-methyltransferase family. (215 aa)
AKL17_3736Chemotaxis protein methyltransferase CheR. (285 aa)
AKL17_3680DNA methylase N-4/N-6 domain-containing protein. (143 aa)
AKL17_3677DNA methylase N-4/N-6 domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family. (223 aa)
AKL17_3578Putative methyltransferase. (192 aa)
AKL17_3551Hypothetical protein. (263 aa)
AKL17_3463protein-L-isoaspartate O-methyltransferase. (217 aa)
AKL17_3457Glycine cleavage T protein. (258 aa)
AKL17_3359Methyltransferase type 11. (264 aa)
AKL17_3329Hypothetical protein. (163 aa)
AKL17_3018DNA adenine methylase Dam. (298 aa)
AKL17_2986B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1258 aa)
AKL17_2853TrmH family RNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (260 aa)
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (340 aa)
AKL17_2825Hypothetical protein. (125 aa)
AKL17_2787N6-adenine-specific DNA methylase. (395 aa)
AKL17_2768Trimethylamine methyltransferase family protein; Belongs to the trimethylamine methyltransferase family. (523 aa)
rpsFMethyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Binds together with S18 to 16S ribosomal RNA. (538 aa)
AKL17_2618DNA methylase N-4/N-6 domain-containing protein. (295 aa)
AKL17_2616Hypothetical protein. (177 aa)
AKL17_2587ParB domain protein nuclease. (456 aa)
rlmE23S rRNA methylase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (288 aa)
AKL17_2486Hypothetical protein. (408 aa)
AKL17_2436NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (343 aa)
AKL17_2377Hypothetical protein. (149 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (219 aa)
trmJHypothetical protein; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. (260 aa)
AKL17_2023Cyclopropane-fatty-acyl-phospholipid synthase. (404 aa)
AKL17_2012Methionine synthase I. (336 aa)
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.