STRINGSTRING
AKL17_3457 AKL17_3457 AKL17_0241 AKL17_0241 AKL17_0242 AKL17_0242 AKL17_0243 AKL17_0243 AKL17_0582 AKL17_0582 AKL17_0631 AKL17_0631 AKL17_2318 AKL17_2318 AKL17_2921 AKL17_2921 AKL17_3011 AKL17_3011 AKL17_2319 AKL17_2319
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKL17_3457Glycine cleavage T protein. (258 aa)
AKL17_0241Glycine cleavage system T protein; Belongs to the GcvT family. (793 aa)
AKL17_0242Sarcosine oxidase, gamma subunit. (128 aa)
AKL17_0243Sarcosine oxidase alpha subunit; Belongs to the GcvT family. (375 aa)
AKL17_0582Aminomethyltransferase protein; Belongs to the GcvT family. (350 aa)
AKL17_0631Dimethylglycine dehydrogenase; Belongs to the GcvT family. (833 aa)
AKL17_2318Sarcosine oxidase subunit gamma. (186 aa)
AKL17_2921Glycine cleavage T protein. (374 aa)
AKL17_3011Sarcosine oxidase, alpha subunit; Belongs to the GcvT family. (981 aa)
AKL17_2319Putative sarcosine oxidase, alpha subunit; Belongs to the GcvT family. (993 aa)
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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