STRINGSTRING
AGY92171.1 AGY92171.1 AGY91169.1 AGY91169.1 AGY91435.1 AGY91435.1 AGY92041.1 AGY92041.1 AGY92298.1 AGY92298.1 metZ metZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGY92171.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (278 aa)
AGY91169.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (296 aa)
AGY91435.1O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (425 aa)
AGY92041.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (308 aa)
AGY92298.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (224 aa)
metZHypothetical protein; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (393 aa)
Your Current Organism:
Spiribacter curvatus
NCBI taxonomy Id: 1335757
Other names: Arhodomonas sp. SP71, CECT 8396, DSM 28542, S. curvatus, Spiribacter curvatus Leon et al. 2015, Spiribacter sp. UAH-SP71, strain UAH-SP71
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