(17 nodes) Immune System network (Mesoplasma chauliocola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	apt	Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (170 aa)
	GCA_000518825_00162	Unannotated protein. (104 aa)
	pgi	Unannotated protein; Belongs to the GPI family. (213 aa)
	GCA_000518825_00160	Unannotated protein. (40 aa)
	alaS	Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (322 aa)
	GCA_000518825_01183	Unannotated protein. (125 aa)
	GCA_000518825_01182	Unannotated protein. (61 aa)
	CK556_03295	Unannotated protein; Belongs to the NAPRTase family. (71 aa)
	GCA_000518825_00993	Unannotated protein. (48 aa)
	GCA_000518825_00992	Unannotated protein. (54 aa)
	GCA_000518825_00991	Unannotated protein. (69 aa)
	GCA_000518825_00749	Unannotated protein. (36 aa)
	serS	Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (156 aa)
	GCA_000518825_00747	Unannotated protein. (129 aa)
	GCA_000518825_00512	Unannotated protein. (41 aa)
	deoC	Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (156 aa)
	cdd	Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (101 aa)

Your Current Organism:

Mesoplasma chauliocola

NCBI taxonomy Id: 1336232
Other names: M. chauliocola ATCC 49578, Mesoplasma chauliocola ATCC 49578

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CK556_03295	GCA_000518825_00991	GCA_000518825_00994	GCA_000518825_00991	Unannotated protein; Belongs to the NAPRTase family.	Unannotated protein.	0.956
CK556_03295	GCA_000518825_00992	GCA_000518825_00994	GCA_000518825_00992	Unannotated protein; Belongs to the NAPRTase family.	Unannotated protein.	0.964
CK556_03295	GCA_000518825_00993	GCA_000518825_00994	GCA_000518825_00993	Unannotated protein; Belongs to the NAPRTase family.	Unannotated protein.	0.813
CK556_03295	apt	GCA_000518825_00994	GCA_000518825_00221	Unannotated protein; Belongs to the NAPRTase family.	Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	0.443
GCA_000518825_00160	pgi	GCA_000518825_00160	GCA_000518825_00161	Unannotated protein.	Unannotated protein; Belongs to the GPI family.	0.634
GCA_000518825_00162	pgi	GCA_000518825_00162	GCA_000518825_00161	Unannotated protein.	Unannotated protein; Belongs to the GPI family.	0.986
GCA_000518825_00512	cdd	GCA_000518825_00512	GCA_000518825_00484	Unannotated protein.	Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.412
GCA_000518825_00512	deoC	GCA_000518825_00512	GCA_000518825_00511	Unannotated protein.	Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.	0.581
GCA_000518825_00747	serS	GCA_000518825_00747	GCA_000518825_00748	Unannotated protein.	Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).	0.978
GCA_000518825_00749	serS	GCA_000518825_00749	GCA_000518825_00748	Unannotated protein.	Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).	0.572
GCA_000518825_00991	CK556_03295	GCA_000518825_00991	GCA_000518825_00994	Unannotated protein.	Unannotated protein; Belongs to the NAPRTase family.	0.956
GCA_000518825_00991	GCA_000518825_00992	GCA_000518825_00991	GCA_000518825_00992	Unannotated protein.	Unannotated protein.	0.969
GCA_000518825_00991	GCA_000518825_00993	GCA_000518825_00991	GCA_000518825_00993	Unannotated protein.	Unannotated protein.	0.679
GCA_000518825_00991	apt	GCA_000518825_00991	GCA_000518825_00221	Unannotated protein.	Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	0.443
GCA_000518825_00992	CK556_03295	GCA_000518825_00992	GCA_000518825_00994	Unannotated protein.	Unannotated protein; Belongs to the NAPRTase family.	0.964
GCA_000518825_00992	GCA_000518825_00991	GCA_000518825_00992	GCA_000518825_00991	Unannotated protein.	Unannotated protein.	0.969
GCA_000518825_00992	GCA_000518825_00993	GCA_000518825_00992	GCA_000518825_00993	Unannotated protein.	Unannotated protein.	0.803
GCA_000518825_00992	apt	GCA_000518825_00992	GCA_000518825_00221	Unannotated protein.	Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	0.443
GCA_000518825_00993	CK556_03295	GCA_000518825_00993	GCA_000518825_00994	Unannotated protein.	Unannotated protein; Belongs to the NAPRTase family.	0.813
GCA_000518825_00993	GCA_000518825_00991	GCA_000518825_00993	GCA_000518825_00991	Unannotated protein.	Unannotated protein.	0.679